Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 1.1e-128 463.4 239 100.0
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 3.7e-81 305.4 222 69.4
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 3.6e-76 288.9 248 64.5
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.4e-75 287.0 239 65.3
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 5.2e-75 285.0 242 64.0
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.5e-74 283.5 242 63.6
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.5e-74 283.5 238 65.5
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 5.8e-74 281.6 238 63.4
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 2.2e-73 279.6 231 66.7
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.7e-73 278.9 237 64.1
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.2e-72 275.8 237 63.7
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 4.1e-72 275.4 237 62.0
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 9.2e-72 274.2 235 62.1
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.2e-71 273.9 251 59.8
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.2e-71 273.9 250 60.0
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.0e-71 273.1 246 62.6
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.6e-71 271.9 216 67.1
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 4.6e-71 271.9 249 61.4
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 2.3e-70 269.6 251 61.0
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.9e-70 268.9 252 59.5
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 3.9e-70 268.9 233 62.2
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 8.6e-70 267.7 234 60.7
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 8.6e-70 267.7 235 63.4
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 1.5e-69 266.9 252 59.1
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.5e-69 266.9 252 59.5
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.5e-69 266.9 228 60.1
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.6e-69 265.0 224 62.5
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.6e-68 263.5 252 58.7
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 2.1e-68 263.1 233 63.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 4.7e-68 261.9 236 64.4
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 1.8e-67 260.0 233 62.2
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 6.8e-67 258.1 234 62.4
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 1.5e-66 256.9 243 58.8
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 3.4e-66 255.8 240 56.7
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 9.8e-66 254.2 233 56.7
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.7e-65 253.4 223 63.7
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 8.3e-65 251.1 211 61.1
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 5.4e-64 248.4 250 57.6
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.6e-63 246.9 238 58.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 2.0e-63 246.5 239 56.9
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 3.5e-63 245.7 241 61.0
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 3.5e-63 245.7 246 58.1
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 4.6e-63 245.4 245 57.6
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 7.8e-63 244.6 241 56.8
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 3.0e-62 242.7 233 59.2
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 3.9e-62 242.3 212 63.7
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 5.0e-62 241.9 240 58.3
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.0e-62 241.9 216 59.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 5.0e-62 241.9 237 57.4
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 6.6e-62 241.5 254 56.7
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 8.6e-62 241.1 216 64.4
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.1e-61 240.7 250 56.4
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.9e-61 240.0 237 56.5
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 1.9e-61 240.0 237 57.0
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 4.3e-61 238.8 237 55.7
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 1.2e-60 237.3 241 59.3
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.1e-60 236.5 216 58.8
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 2.8e-60 236.1 222 60.4
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 6.2e-60 235.0 239 52.7
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.1e-59 234.2 235 56.2
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 2.3e-59 233.0 241 58.1
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.4e-58 229.2 220 58.6
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.4e-58 229.2 211 55.0
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 3.4e-58 229.2 239 52.3
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.4e-58 228.8 239 54.4
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 4.4e-58 228.8 239 55.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 5.8e-58 228.4 226 56.6
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.5e-58 228.0 242 56.2
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.3e-57 227.3 234 52.1
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.3e-57 227.3 234 52.1
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.7e-57 225.7 186 64.5
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 6.4e-57 224.9 216 57.4
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.4e-56 223.8 232 55.2
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 4.1e-56 222.2 226 55.8
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 7.1e-56 221.5 235 54.0
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 9.2e-56 221.1 232 53.9
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 9.2e-56 221.1 241 54.4
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.2e-55 220.7 235 52.8
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 2.1e-55 219.9 238 54.6
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 2.7e-55 219.5 241 52.7
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 3.5e-55 219.2 217 53.0
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.3e-54 216.5 233 57.5
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 3.9e-54 215.7 222 53.2
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 6.6e-54 214.9 237 52.3
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 4.3e-53 212.2 243 53.1
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 9.5e-53 211.1 243 53.1
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 9.5e-53 211.1 243 53.1
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 9.5e-53 211.1 242 52.5
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.6e-52 210.3 243 52.7
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.6e-52 210.3 230 53.5
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 2.8e-52 209.5 241 49.4
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.1e-51 206.1 242 50.0
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.0e-51 205.7 202 53.0
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 6.8e-51 204.9 246 48.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 6.8e-51 204.9 221 56.1
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 3.4e-50 202.6 200 55.0
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 4.4e-50 202.2 205 55.1
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 7.6e-50 201.4 236 48.3
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.2e-49 199.9 207 52.7
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 2.4e-48 196.4 218 50.9
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.2e-47 194.1 226 50.9
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 2.7e-47 193.0 262 45.8
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.0e-46 191.0 241 51.0
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.1e-45 187.6 203 52.2
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 4.3e-45 185.7 217 53.5
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 4.3e-45 185.7 235 47.2
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 3.6e-44 182.6 233 46.4
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.8e-43 180.3 283 42.4
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 1.2e-42 177.6 188 51.1
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.5e-42 177.2 239 44.4
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 4.4e-42 175.6 197 52.8
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.1e-40 171.0 286 40.9
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 2.1e-39 166.8 192 52.6
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 7.8e-39 164.9 185 53.5
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.0e-38 164.5 192 52.1
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 5.1e-38 162.2 241 44.8
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 6.6e-38 161.8 241 44.8
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.8e-33 146.0 179 48.6
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 6.4e-33 145.2 211 41.2
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 6.4e-33 145.2 233 42.1
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.2e-32 142.5 231 42.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.8e-30 137.1 201 45.8
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 1.8e-27 127.1 136 53.7
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.7e-23 113.2 226 37.2
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.8e-19 100.5 91 63.7
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 1.2e-18 97.8 130 50.0
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.3e-17 94.4 113 48.7
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 6.0e-15 85.5 170 35.3
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.6e-07 59.3 36 77.8
HPP92_019356 Vanilla planifolia HOM05D006151 ORTHO05D007487 4.6e-07 59.3 95 43.2


User provided reference genes

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