Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1380 Cannabis sativa HOM05D005534 ORTHO05D006642 1.1e-69 266.5 134 100.0
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 1.6e-60 236.1 132 85.6
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 1.6e-60 236.1 132 86.4
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 2.6e-60 235.3 132 84.8
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 2.6e-60 235.3 132 86.4
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 2.6e-60 235.3 132 86.4
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 3.5e-60 235.0 132 85.6
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 3.5e-60 235.0 133 83.5
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 3.5e-60 235.0 131 85.5
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 7.7e-60 233.8 132 83.3
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 7.7e-60 233.8 133 85.7
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 1.0e-59 233.4 132 85.6
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 1.3e-59 233.0 132 85.6
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 2.2e-59 232.3 132 84.8
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 2.9e-59 231.9 131 85.5
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 2.9e-59 231.9 132 85.6
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 2.9e-59 231.9 132 84.8
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 2.9e-59 231.9 132 84.8
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 3.8e-59 231.5 131 85.5
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 3.8e-59 231.5 132 84.1
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 3.8e-59 231.5 133 82.0
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 3.8e-59 231.5 132 84.8
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 5.0e-59 231.1 132 83.3
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 5.0e-59 231.1 131 84.7
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 5.0e-59 231.1 132 83.3
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 6.5e-59 230.7 132 84.1
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 1.1e-58 229.9 132 82.6
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 1.1e-58 229.9 132 83.3
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 1.1e-58 229.9 132 83.3
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 1.5e-58 229.6 131 84.0
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 1.5e-58 229.6 131 84.7
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 1.5e-58 229.6 132 83.3
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 1.9e-58 229.2 133 85.0
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 1.9e-58 229.2 131 84.0
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 1.9e-58 229.2 132 84.1
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 1.9e-58 229.2 132 82.6
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 1.9e-58 229.2 132 81.1
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 2.5e-58 228.8 132 84.1
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 2.5e-58 228.8 132 83.3
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 3.2e-58 228.4 131 82.4
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 3.2e-58 228.4 132 83.3
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 3.2e-58 228.4 132 83.3
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 3.2e-58 228.4 132 80.3
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 4.2e-58 228.0 130 84.6
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 5.5e-58 227.6 132 81.8
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 7.2e-58 227.3 131 83.2
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 7.2e-58 227.3 132 82.6
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 7.2e-58 227.3 132 84.8
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 7.2e-58 227.3 132 81.1
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 7.2e-58 227.3 132 79.5
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 7.2e-58 227.3 132 84.8
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 9.4e-58 226.9 132 82.6
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 9.4e-58 226.9 131 81.7
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 1.2e-57 226.5 132 82.6
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 1.2e-57 226.5 131 82.4
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 1.6e-57 226.1 132 84.1
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 1.6e-57 226.1 130 84.6
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 1.6e-57 226.1 132 81.1
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 2.1e-57 225.7 131 82.4
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 2.1e-57 225.7 131 82.4
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 2.1e-57 225.7 132 80.3
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 2.7e-57 225.3 131 80.9
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 2.7e-57 225.3 132 81.1
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 4.7e-57 224.6 143 79.0
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 4.7e-57 224.6 132 81.1
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 1.0e-56 223.4 134 82.8
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 1.4e-56 223.0 132 80.3
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 1.8e-56 222.6 143 78.3
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.8e-56 222.6 131 80.2
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 2.3e-56 222.2 134 81.3
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 4.0e-56 221.5 132 79.5
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 5.2e-56 221.1 133 78.9
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 6.8e-56 220.7 131 80.9
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 6.8e-56 220.7 131 79.4
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 1.2e-55 219.9 130 80.0
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 1.7e-54 216.1 155 71.0
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 3.7e-54 214.9 132 80.3
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 3.7e-54 214.9 165 67.9
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 1.4e-53 213.0 159 67.9
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 7.0e-53 210.7 131 79.4
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 2.9e-51 205.3 153 71.2
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 5.0e-51 204.5 117 83.8
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 1.9e-50 202.6 183 60.1
Hma1.2p1_0708F.1_g207140 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 3.2e-50 201.8 118 82.2
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 3.2e-50 201.8 177 59.9
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 3.2e-50 201.8 177 59.9
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 5.5e-50 201.1 169 61.5
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 1.2e-49 199.9 132 75.0
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 4.7e-49 198.0 182 59.9
C07p20870 Brassica napus HOM05D005534 ORTHO05D006642 1.3e-46 189.9 126 74.6
BolC7t42620H Brassica oleracea HOM05D005534 ORTHO05D006642 1.3e-46 189.9 126 74.6
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 2.2e-46 189.1 132 66.7
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 4.9e-46 188.0 130 70.0
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 4.9e-46 188.0 218 50.5
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 6.3e-46 187.6 130 70.0
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 1.4e-45 186.4 130 67.7
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 2.0e-44 182.6 132 68.9
BcaC06g34996 Brassica carinata HOM05D005534 ORTHO05D006642 1.7e-43 179.5 122 72.1
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 5.0e-43 177.9 156 60.9
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 5.0e-43 177.9 103 85.4
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 6.6e-43 177.6 132 68.2
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 1.9e-42 176.0 102 82.4
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 4.2e-42 174.9 97 86.6
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 1.8e-40 169.5 97 84.5
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 5.2e-40 167.9 97 85.6
A07p14190 Brassica napus HOM05D005534 ORTHO05D006642 1.5e-39 166.4 157 61.8
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 2.0e-39 166.0 100 79.0
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 4.9e-38 161.4 96 83.3
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 2.0e-36 156.0 92 80.4
Lj1A297G57 Lonicera japonica HOM05D005534 ORTHO05D006642 5.6e-34 147.9 87 79.3
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 1.6e-33 146.4 165 49.7
TPR.G30718 Trifolium pratense HOM05D005534 ORTHO05D006642 1.1e-29 133.7 116 62.9
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 1.0e-27 127.1 67 91.0
PRCOL_00005850 Prasinoderma coloniale HOM05D005534 ORTHO05D006642 2.3e-27 125.9 133 50.4
Cfa025826 Carpinus fangiana HOM05D005534 ORTHO05D006642 2.5e-26 122.5 127 49.6
CSS0018807 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 8.9e-16 87.4 45 91.1
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 1.5e-15 86.7 45 88.9
CSS0033231 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 2.6e-15 85.9 45 88.9
Lj1A297T60 Lonicera japonica HOM05D005534 ORTHO05D006642 3.4e-15 85.5 45 86.7
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 3.4e-15 85.5 45 88.9
HanXRQChr11g0339001 Helianthus annuus HOM05D005534 ORTHO05D006642 5.8e-15 84.7 55 72.7
MCO12G480 Micromonas commoda HOM05D005534 ORTHO05D006642 5.8e-15 84.7 110 46.4
Potri.013G101900 Populus trichocarpa HOM05D005534 ORTHO05D006642 1.6e-12 76.6 45 88.9
AagrBONN_evm.TU.Sc2ySwM_117.1319 Anthoceros agrestis HOM05D005534 ORTHO05D006642 3.9e-11 72.0 45 73.3
BraA07t29177Z Brassica rapa HOM05D005534 ORTHO05D006642 9.6e-10 67.4 35 85.7
Lj1A290T43 Lonicera japonica HOM05D005534 ORTHO05D006642 5.2e-08 61.6 36 72.2


User provided reference genes

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