Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.9e-185 651.7 324 100.0
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 2.5e-157 558.9 317 86.8
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 2.6e-154 548.9 317 84.9
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 6.4e-153 544.3 323 83.9
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 9.3e-152 540.4 325 81.8
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.2e-151 540.0 317 84.2
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 2.7e-151 538.9 325 82.2
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.7e-151 538.9 325 82.2
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.5e-151 538.5 317 83.9
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.5e-151 538.5 317 84.2
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 6.0e-151 537.7 325 81.8
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.3e-150 535.8 325 81.2
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.0e-150 535.4 325 81.5
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 3.9e-150 535.0 317 83.9
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 5.1e-150 534.6 325 80.9
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 6.7e-150 534.3 315 83.2
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 6.7e-150 534.3 315 83.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 8.7e-150 533.9 315 83.5
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.9e-149 532.7 325 81.2
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 5.6e-149 531.2 325 80.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.3e-148 530.0 321 81.9
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.1e-147 525.4 321 80.1
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 9.0e-147 523.9 317 82.0
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 3.4e-146 521.9 323 81.4
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.5e-146 521.5 331 79.5
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 5.8e-146 521.2 327 79.5
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.0e-145 520.4 323 79.3
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.0e-145 520.4 320 79.7
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 6.5e-145 517.7 323 78.6
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 8.4e-145 517.3 293 84.3
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 3.2e-144 515.4 321 79.8
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 4.2e-144 515.0 321 79.8
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 4.2e-144 515.0 322 79.8
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 7.1e-144 514.2 316 79.4
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.6e-143 513.1 326 77.9
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 6.0e-143 511.1 321 78.8
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 2.3e-142 509.2 323 77.7
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 6.7e-142 507.7 319 80.6
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.9e-141 506.1 323 78.0
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.9e-141 506.1 325 78.8
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 3.3e-141 505.4 322 78.0
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.3e-141 505.4 323 77.7
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 5.7e-141 504.6 314 79.3
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.2e-140 502.7 326 78.8
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 3.7e-140 501.9 323 77.4
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 6.3e-140 501.1 326 78.5
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 6.3e-140 501.1 326 78.5
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-139 500.4 323 77.1
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.1e-139 500.4 323 77.1
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.4e-139 500.0 312 79.8
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 2.4e-139 499.2 314 79.0
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 5.3e-139 498.0 324 76.9
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 5.3e-139 498.0 324 76.9
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 9.0e-139 497.3 327 75.2
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 2.6e-138 495.7 331 76.4
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 7.7e-138 494.2 340 74.1
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.3e-137 493.4 327 77.7
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 2.2e-137 492.7 323 77.1
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 7.2e-136 487.6 336 73.2
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 9.4e-136 487.3 326 75.5
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 9.4e-136 487.3 283 82.7
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 1.2e-135 486.9 327 75.2
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.0e-134 483.8 283 82.3
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 3.9e-134 481.9 325 75.4
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 6.7e-134 481.1 287 82.2
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 2.4e-131 472.6 316 75.9
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.7e-129 466.5 324 73.1
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 6.5e-129 464.5 323 72.4
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.1e-128 463.8 391 64.5
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 7.2e-128 461.1 318 75.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.8e-126 456.4 320 73.4
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 1.1e-125 453.8 429 59.2
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.0e-121 440.7 320 70.3
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 2.9e-121 439.1 309 68.6
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 8.5e-121 437.6 265 82.6
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 9.4e-120 434.1 270 80.0
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 2.3e-118 429.5 284 76.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 3.9e-118 428.7 306 70.6
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-117 427.2 258 79.5
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.2e-116 422.9 344 66.0
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 2.8e-116 422.5 267 77.2
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 3.7e-116 422.2 288 74.0
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 5.3e-115 418.3 278 75.9
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 2.6e-114 416.0 312 65.4
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 3.5e-114 415.6 254 80.7
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 5.9e-114 414.8 260 75.8
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.3e-113 413.7 299 72.2
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.1e-111 406.4 288 66.7
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 3.4e-109 399.1 322 65.8
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 5.7e-109 398.3 317 65.9
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.7e-105 386.7 310 60.3
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.5e-104 382.9 317 64.4
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 2.5e-104 382.9 296 61.5
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.0e-102 377.5 645 40.3
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 5.2e-102 375.2 251 76.1
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 5.4e-99 365.2 259 66.8
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 7.7e-98 361.3 284 66.5
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 7.5e-93 344.7 316 61.1
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.5e-88 330.5 207 77.8
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 4.7e-87 325.5 311 56.9
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 3.2e-83 312.8 336 55.4
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.9e-76 289.7 239 66.1
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 7.1e-75 285.0 216 63.9
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 9.2e-75 284.6 192 68.2
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-73 281.2 189 75.7
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 2.4e-67 260.0 188 72.3
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 3.3e-64 249.6 162 77.2
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 7.3e-64 248.4 167 72.5
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.2e-62 242.3 322 48.4
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 3.8e-60 236.1 249 55.0
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 4.2e-59 232.6 159 70.4
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 9.9e-53 211.5 174 60.3
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 2.1e-50 203.8 145 70.3
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.3e-48 195.3 131 74.0
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 3.3e-40 169.9 90 85.6
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 4.3e-40 169.5 95 83.2
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.3e-31 141.4 275 35.3
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.7e-31 139.8 92 72.8
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 7.6e-29 132.1 80 76.2
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.1e-27 128.3 282 29.8
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.6e-18 97.8 351 26.2
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 5.3e-14 82.8 47 80.9
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 3.8e-12 76.6 54 74.1
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 2.5e-11 73.9 52 75.0
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 8.8e-09 65.5 63 55.6
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.8e-07 60.5 56 58.9


User provided reference genes

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