Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1316 Cannabis sativa HOM05D014696 ORTHO05D010823 5.1e-119 431.0 206 100.0
CANSAT56G2820 Cannabis sativa HOM05D014696 ORTHO05D010823 5.7e-30 135.2 65 98.5
CANSAT64G2848 Cannabis sativa HOM05D014696 ORTHO05D010823 1.6e-19 100.5 50 94.0
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 1.1e-15 87.8 193 31.6
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 5.2e-15 85.5 186 28.5
CANSAT01G0411 Cannabis sativa HOM05D009769 ORTHO05D010823 8.9e-15 84.7 166 33.7
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 8.9e-15 84.7 166 34.3
CANSAT25G3518 Cannabis sativa HOM05D009769 ORTHO05D010823 1.5e-14 84.0 193 29.5
Ciclev10031514m.g Citrus clementina HOM05D002639 ORTHO05D010823 4.4e-14 82.4 179 29.1
CANSAT78G1808 Cannabis sativa HOM05D009769 ORTHO05D010823 9.8e-14 81.3 179 31.3
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 2.4e-12 76.6 176 28.4
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 3.2e-12 76.3 171 30.4
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 9.2e-12 74.7 147 27.9
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 4.6e-11 72.4 147 27.2
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 4.6e-11 72.4 147 27.2
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 1.3e-10 70.9 150 28.0
CANSAT80G2744 Cannabis sativa HOM05D009769 ORTHO05D010823 1.1e-09 67.8 113 36.3
SGA_v2.0_scaffold74G24629 Striga asiatica HOM05D017631 ORTHO05D009908 1.9e-09 67.0 185 24.9
GSVIVG01000313001 Vitis vinifera HOM05D008451 ORTHO05D009908 7.3e-09 65.1 134 30.6
arahy.Tifrunner.gnm1.ann1.4WBN6F Arachis hypogaea HOM05D008486 ORTHO05D010657 2.1e-08 63.5 158 31.0
SGA_v2.0_scaffold81G26003 Striga asiatica HOM05D017631 ORTHO05D009908 3.6e-08 62.8 185 23.8
GSVIVG01000319001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.6e-08 62.8 134 29.9
GSVIVG01012273001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.7e-08 62.4 139 29.5
Potri.017G019466 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.1e-08 61.6 138 29.7
GSVIVG01005673001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.1e-08 61.6 134 29.1
GSVIVG01018225001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.1e-08 61.6 132 29.5
GSVIVG01037305001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.1e-08 61.6 134 29.9
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 1.1e-07 61.2 130 26.9
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.1e-07 61.2 176 24.4
SGA_v2.0_scaffold142G35697 Striga asiatica HOM05D017631 ORTHO05D009908 1.1e-07 61.2 172 23.8
GSVIVG01003489001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.1e-07 61.2 134 29.9
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 1.4e-07 60.8 141 30.5
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 1.4e-07 60.8 141 30.5
GSVIVG01023574001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.4e-07 60.8 134 29.9
GSVIVG01034661001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.4e-07 60.8 136 33.1
QL08p032772 Quercus lobata HOM05D022192 ORTHO05D009908 1.8e-07 60.5 133 30.8
GSVIVG01030359001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.8e-07 60.5 136 32.4
GSVIVG01038481001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.8e-07 60.5 134 29.9
GSVIVG01030850001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.3e-07 60.1 135 31.1
GSVIVG01032145001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.3e-07 60.1 134 29.1
GSVIVG01030778001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.1e-07 59.7 135 31.9
CANSAT21G1911 Cannabis sativa HOM05D009769 ORTHO05D010823 4.0e-07 59.3 104 36.5
GSVIVG01022672001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.0e-07 59.3 134 29.9
GSVIVG01025899001 Vitis vinifera HOM05D008451 ORTHO05D009908 4.0e-07 59.3 136 32.4
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 5.2e-07 58.9 109 26.6
GSVIVG01021857001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.2e-07 58.9 134 29.1
GSVIVG01022852001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.2e-07 58.9 134 29.9
Phvul.007G072700 Phaseolus vulgaris HOM05D012685 ORTHO05D008631 6.8e-07 58.5 182 25.3
GSVIVG01027219001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.2e-06 57.8 138 32.6
COL.COLO4_15720 Corchorus olitorius HOM05D056761 ORTHO05D009908 1.5e-06 57.4 142 26.8
Dinv01242 Davidia involucrata HOM05D010363 ORTHO05D008693 1.5e-06 57.4 153 25.5
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 1.5e-06 57.4 166 24.1
GSVIVG01010182001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.5e-06 57.4 134 29.1
GSVIVG01024189001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.5e-06 57.4 134 29.1
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 2.0e-06 57.0 146 25.3
GSVIVG01001707001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.6e-06 56.6 134 29.1
GSVIVG01022471001 Vitis vinifera HOM05D008451 ORTHO05D009908 2.6e-06 56.6 133 29.3
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 3.4e-06 56.2 125 26.4
GSVIVG01001944001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.4e-06 56.2 134 28.4
GSVIVG01032187001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.4e-06 56.2 139 28.1
CANSAT78G1568 Cannabis sativa HOM05D009769 ORTHO05D010823 4.4e-06 55.8 119 31.9
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 4.4e-06 55.8 125 26.4
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 7.5e-06 55.1 186 28.5
RcHm_v2.0_Chr7g0189601 Rosa chinensis HOM05D010142 ORTHO05D012232 7.5e-06 55.1 125 26.4
FAN24G2093 Fragaria x ananassa HOM05D004096 ORTHO05D029602 9.9e-06 54.7 125 25.6


User provided reference genes

Program Settings