Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1307 Cannabis sativa HOM05D008721 ORTHO05D000137 2.9e-55 218.4 116 100.0
CANSAT80G0461 Cannabis sativa HOM05D008721 ORTHO05D000137 8.4e-55 216.9 116 93.1
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 2.5e-54 215.3 116 98.3
CANSAT78G0758 Cannabis sativa HOM05D008721 ORTHO05D000137 1.8e-49 199.1 116 90.5
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 1.5e-48 196.1 116 88.8
CANSAT35G1468 Cannabis sativa HOM05D008897 ORTHO05D000137 9.1e-41 170.2 96 83.3
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 4.4e-19 98.2 102 48.0
CANSAT11G1859 Cannabis sativa HOM05D008721 ORTHO05D000137 7.5e-19 97.4 102 48.0
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 1.3e-18 96.7 102 48.0
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-18 96.7 102 48.0
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.7e-18 96.3 102 48.0
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 2.2e-18 95.9 102 47.1
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 6.3e-18 94.4 102 47.1
CANSAT21G2500 Cannabis sativa HOM05D008721 ORTHO05D000137 1.8e-17 92.8 98 48.0
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 2.4e-17 92.4 98 46.9
CANSAT78G1843 Cannabis sativa HOM05D008721 ORTHO05D000137 1.6e-16 89.7 102 45.1
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 2.0e-16 89.4 107 39.3
CANSAT25G0186 Cannabis sativa HOM05D008636 ORTHO05D000137 2.7e-16 89.0 99 47.5
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 3.5e-16 88.6 99 47.5
CANSAT25G1221 Cannabis sativa HOM05D008636 ORTHO05D000137 3.5e-16 88.6 99 46.5
CANSAT01G0402 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 87.8 99 46.5
CANSAT25G3447 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 87.8 99 46.5
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 87.8 99 46.5
CANSAT56G1525 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-16 87.8 99 46.5
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.2e-13 80.1 102 42.2
CANSAT35G0235 Cannabis sativa HOM05D008636 ORTHO05D000137 4.7e-13 78.2 99 43.4
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 6.1e-13 77.8 99 43.4
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.0e-12 77.0 107 40.2
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-12 76.6 111 36.0
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.8e-12 76.3 66 53.0
CANSAT35G0233 Cannabis sativa HOM05D008636 ORTHO05D000137 3.0e-12 75.5 99 41.4
Nitab4.5_0028280g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.0e-12 75.1 111 34.2
SGA_v2.0_scaffold1G00046 Striga asiatica HOM05D000679 ORTHO05D000137 8.8e-12 73.9 103 40.8
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 2.0e-11 72.8 55 58.2
Peaxi162Scf00237g00177 Petunia axillaris HOM05D000679 ORTHO05D000137 2.0e-11 72.8 105 36.2
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.6e-11 72.4 97 38.1
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.6e-11 72.4 107 34.6
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.4e-11 71.6 110 34.5
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-10 70.1 107 36.4
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 1.7e-10 69.7 116 33.6
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.7e-10 69.7 95 34.7
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-10 69.7 123 35.8
CAN.G1071.1 Capsicum annuum HOM05D009195 ORTHO05D000137 2.2e-10 69.3 115 31.3
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 4.8e-10 68.2 109 34.9
CAN.G197.8 Capsicum annuum HOM05D000644 ORTHO05D000137 6.3e-10 67.8 115 33.0
Nitab4.5_0000022g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.3e-10 67.8 112 32.1
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.3e-10 67.8 106 36.8
CANSAT64G1018 Cannabis sativa HOM05D008721 ORTHO05D000137 8.3e-10 67.4 52 53.8
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-10 67.4 107 35.5
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-10 67.4 107 35.5
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.3e-10 67.4 107 35.5
ATR0365G002 Amborella trichopoda HOM05D008636 ORTHO05D000137 1.1e-09 67.0 62 53.2
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.1e-09 67.0 108 31.5
Peaxi162Scf00034g02725 Petunia axillaris HOM05D010453 ORTHO05D012004 1.1e-09 67.0 74 45.9
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 1.4e-09 66.6 110 30.9
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 2.4e-09 65.9 53 56.6
CAN.G50.5 Capsicum annuum HOM05D009195 ORTHO05D000137 2.4e-09 65.9 99 34.3
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-09 65.9 108 34.3
Peaxi162Scf00048g01514 Petunia axillaris HOM05D010453 ORTHO05D012004 2.4e-09 65.9 74 44.6
Peaxi162Scf00218g00812 Petunia axillaris HOM05D010453 ORTHO05D000137 2.4e-09 65.9 74 44.6
Nitab4.5_0000514g0180 Nicotiana tabacum HOM05D006812 ORTHO05D012242 5.4e-09 64.7 75 37.3
Nitab4.5_0003770g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.4e-09 64.7 62 46.8
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.0e-09 64.3 97 39.2
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.0e-09 64.3 109 34.9
CAN.G998.1 Capsicum annuum HOM05D009195 ORTHO05D000137 9.1e-09 63.9 79 38.0
Nitab4.5_0001724g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.1e-09 63.9 59 49.2
Nitab4.5_0008937g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.1e-09 63.9 82 42.7
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 1.2e-08 63.5 111 36.0
CAN.G58.24 Capsicum annuum HOM05D009195 ORTHO05D000137 1.2e-08 63.5 72 40.3
Peaxi162Scf00130g00004 Petunia axillaris HOM05D010453 ORTHO05D012004 1.6e-08 63.2 62 46.8
Peaxi162Scf00341g00032 Petunia axillaris HOM05D010453 ORTHO05D012004 1.6e-08 63.2 63 42.9
Peaxi162Scf00535g00027 Petunia axillaris HOM05D010453 ORTHO05D012004 1.6e-08 63.2 62 46.8
CANSAT78G2225 Cannabis sativa HOM05D009472 ORTHO05D000137 2.0e-08 62.8 111 36.0
Peaxi162Scf01147g00017 Petunia axillaris HOM05D010453 ORTHO05D000137 2.0e-08 62.8 95 33.7
Peaxi162Scf01691g00007 Petunia axillaris HOM05D010453 ORTHO05D012004 2.0e-08 62.8 55 52.7
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 2.0e-08 62.8 106 34.0
CANSAT78G2078 Cannabis sativa HOM05D008636 ORTHO05D000482 2.7e-08 62.4 91 38.5
CAN.G977.6 Capsicum annuum HOM05D009195 ORTHO05D000137 2.7e-08 62.4 69 39.1
CANSAT25G1319 Cannabis sativa HOM05D000679 ORTHO05D000137 3.5e-08 62.0 111 36.0
Nitab4.5_0000263g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.5e-08 62.0 69 40.6
Nitab4.5_0006099g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.5e-08 61.6 105 36.2
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 4.5e-08 61.6 100 30.0
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.9e-08 61.2 107 33.6
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 7.7e-08 60.8 123 28.5
Peaxi162Scf00097g00213 Petunia axillaris HOM05D010453 ORTHO05D012004 7.7e-08 60.8 62 43.5
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 1.0e-07 60.5 109 30.3
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 1.0e-07 60.5 111 36.0
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.0e-07 60.5 112 34.8
Nitab4.5_0000727g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.3e-07 60.1 60 50.0
Nitab4.5_0001504g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-07 60.1 106 34.9
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 1.7e-07 59.7 109 28.4
Nitab4.5_0014640g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.3e-07 59.3 76 43.4
Peaxi162Scf00159g00113 Petunia axillaris HOM05D010453 ORTHO05D012004 2.3e-07 59.3 56 50.0
PGSC0003DMG400040109 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.3e-07 59.3 104 32.7
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 2.9e-07 58.9 51 47.1
CAN.G326.5 Capsicum annuum HOM05D009195 ORTHO05D016873 2.9e-07 58.9 80 36.2
Sopen03g006990 Solanum pennellii HOM05D000679 ORTHO05D000137 3.8e-07 58.5 112 33.9
Sopen06g011260 Solanum pennellii HOM05D000679 ORTHO05D000137 3.8e-07 58.5 109 33.9
SGA_v2.0_scaffold437G51617 Striga asiatica HOM05D000679 ORTHO05D000137 3.8e-07 58.5 107 27.1
CANSAT35G1242 Cannabis sativa HOM05D000679 ORTHO05D000137 5.0e-07 58.2 109 27.5
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 5.0e-07 58.2 104 28.8
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.0e-07 58.2 72 40.3
Peaxi162Scf00852g00024 Petunia axillaris HOM05D010453 ORTHO05D012004 5.0e-07 58.2 104 35.6
Solyc05g150115.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.0e-07 58.2 70 42.9
CANSAT80G0664 Cannabis sativa HOM05D008897 ORTHO05D000137 6.6e-07 57.8 28 96.4
Nitab4.5_0000383g0370 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.6e-07 57.8 105 34.3
Nitab4.5_0001057g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.6e-07 57.8 85 35.3
Nitab4.5_0001843g0200 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.6e-07 57.8 92 35.9
Solyc01g066915.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 6.6e-07 57.8 112 33.0
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 8.6e-07 57.4 112 33.9
Sopen09g012720 Solanum pennellii HOM05D000679 ORTHO05D014686 8.6e-07 57.4 109 34.9
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 8.6e-07 57.4 101 30.7
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-06 57.0 107 32.7
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-06 57.0 113 33.6
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 1.5e-06 56.6 52 51.9
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.5e-06 56.6 92 34.8
Solyc03g034203.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.5e-06 56.6 58 43.1
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-06 56.2 105 34.3
Nitab4.5_0004979g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-06 56.2 105 32.4
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-06 56.2 105 33.3
Peaxi162Scf00215g00052 Petunia axillaris HOM05D010453 ORTHO05D012004 1.9e-06 56.2 54 48.1
Solyc08g016583.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.9e-06 56.2 70 41.4
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-06 56.2 101 29.7
Sopen07g008740 Solanum pennellii HOM05D007732 ORTHO05D010105 1.9e-06 56.2 97 29.9
CAN.G1361.12 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-06 55.8 108 31.5
Nitab4.5_0000379g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-06 55.8 106 34.0
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.5e-06 55.8 74 39.2
CANSAT80G2560 Cannabis sativa HOM05D008897 ORTHO05D000137 3.3e-06 55.5 56 53.6
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 3.3e-06 55.5 79 36.7
CAN.G165.17 Capsicum annuum HOM05D000679 ORTHO05D000137 4.2e-06 55.1 80 36.2
CAN.G897.8 Capsicum annuum HOM05D009195 ORTHO05D000137 4.2e-06 55.1 83 34.9
Nitab4.5_0003465g0040 Nicotiana tabacum HOM05D006812 ORTHO05D012242 4.2e-06 55.1 73 31.5
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.2e-06 55.1 109 30.3
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.2e-06 55.1 108 30.6
CAN.G139.5 Capsicum annuum HOM05D009195 ORTHO05D000137 5.5e-06 54.7 73 35.6
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.5e-06 54.7 106 33.0
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.5e-06 54.7 105 33.3
Nitab4.5_0026057g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.5e-06 54.7 105 33.3
Peaxi162Scf00252g00102 Petunia axillaris HOM05D010453 ORTHO05D012004 5.5e-06 54.7 54 48.1
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 5.5e-06 54.7 101 29.7
PGSC0003DMG400042800 Solanum tuberosum HOM05D000679 ORTHO05D000137 5.5e-06 54.7 109 26.6
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.2e-06 54.3 80 36.2
Sopen04g026570 Solanum pennellii HOM05D000679 ORTHO05D000137 7.2e-06 54.3 100 34.0
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 9.5e-06 53.9 99 26.3
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 9.5e-06 53.9 99 26.3
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 9.5e-06 53.9 99 26.3
CANSAT78G0078 Cannabis sativa HOM05D009472 ORTHO05D000137 9.5e-06 53.9 99 26.3
CANSAT78G0118 Cannabis sativa HOM05D009472 ORTHO05D000137 9.5e-06 53.9 100 29.0
CANSAT78G2148 Cannabis sativa HOM05D008897 ORTHO05D000137 9.5e-06 53.9 34 76.5
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 9.5e-06 53.9 99 26.3
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.5e-06 53.9 69 37.7
Nitab4.5_0001816g0180 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.5e-06 53.9 104 33.7
Nitab4.5_0006678g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.5e-06 53.9 85 34.1
Nitab4.5_0011275g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.5e-06 53.9 62 41.9
Peaxi162Scf01337g00004 Petunia axillaris HOM05D002262 ORTHO05D000137 9.5e-06 53.9 74 39.2
Peaxi162Scf01375g00006 Petunia axillaris HOM05D002262 ORTHO05D000137 9.5e-06 53.9 65 40.0
Solyc07g008677.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 9.5e-06 53.9 112 32.1


User provided reference genes

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