Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 3.2e-41 171.4 91 100.0
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.3e-31 139.4 88 84.1
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 5.1e-31 137.5 91 81.3
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 6.7e-31 137.1 91 82.4
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 8.7e-31 136.7 91 83.5
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 1.5e-30 136.0 91 80.2
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.5e-30 136.0 91 82.4
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 1.9e-30 135.6 91 81.3
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 3.3e-30 134.8 91 80.2
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 4.3e-30 134.4 91 80.2
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 7.4e-30 133.7 89 79.8
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 9.6e-30 133.3 91 79.1
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.3e-29 132.9 91 80.2
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.6e-29 132.5 87 81.6
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.7e-29 131.3 89 77.5
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 6.2e-29 130.6 90 77.8
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.1e-28 129.8 84 83.3
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.4e-28 129.4 91 80.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.4e-28 129.4 91 76.9
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.4e-28 129.4 91 78.0
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 3.1e-28 128.3 88 76.1
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 4.0e-28 127.9 83 83.1
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.0e-28 127.9 88 76.1
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 6.9e-28 127.1 91 76.9
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 6.9e-28 127.1 89 76.4
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 6.9e-28 127.1 91 74.7
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 6.9e-28 127.1 89 76.4
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 9.0e-28 126.7 91 75.8
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 9.0e-28 126.7 82 82.9
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.2e-27 126.3 88 73.9
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.2e-27 126.3 90 73.3
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.2e-27 126.3 86 81.4
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 1.2e-27 126.3 88 77.3
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.0e-27 125.6 91 74.7
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.0e-27 125.6 91 74.7
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.0e-27 125.6 91 74.7
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 2.0e-27 125.6 91 72.5
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 2.0e-27 125.6 86 80.2
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.6e-27 125.2 91 73.6
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 2.6e-27 125.2 88 75.0
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 3.4e-27 124.8 91 70.3
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 3.4e-27 124.8 90 75.6
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 4.5e-27 124.4 86 79.1
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 5.8e-27 124.0 91 71.4
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 7.6e-27 123.6 83 79.5
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 7.6e-27 123.6 83 79.5
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 7.6e-27 123.6 91 70.3
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 1.0e-26 123.2 87 77.0
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.0e-26 123.2 87 77.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.3e-26 122.9 89 73.0
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.3e-26 122.9 91 70.3
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 2.2e-26 122.1 91 69.2
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 2.2e-26 122.1 91 69.2
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 2.2e-26 122.1 91 72.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.2e-26 122.1 91 70.3
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.9e-26 121.7 91 70.3
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.9e-26 121.7 87 74.7
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 3.8e-26 121.3 91 70.3
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 4.9e-26 120.9 91 69.2
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 6.5e-26 120.6 91 68.1
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 8.4e-26 120.2 91 68.1
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 8.4e-26 120.2 88 71.6
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 3.2e-25 118.2 87 74.7
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.2e-25 118.2 88 70.5
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 9.3e-25 116.7 91 68.1
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 9.3e-25 116.7 84 75.0
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.2e-24 116.3 84 76.2
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.6e-24 115.9 84 72.6
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 2.7e-24 115.2 91 72.5
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 3.5e-24 114.8 88 70.5
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 8.7e-23 110.2 91 69.2
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.3e-22 108.2 76 77.6
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.3e-22 107.8 78 75.6
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 1.3e-21 106.3 91 64.8
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 1.6e-21 105.9 90 63.3
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 2.8e-21 105.1 74 77.0
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 6.3e-21 104.0 92 65.2
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 1.4e-20 102.8 88 63.6
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 2.4e-20 102.1 85 68.2
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 5.3e-20 100.9 88 63.6
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 9.0e-20 100.1 75 72.0
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 9.0e-20 100.1 84 65.5
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.0e-19 99.0 75 73.3
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.6e-19 98.6 74 73.0
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 3.4e-19 98.2 71 70.4
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.4e-19 98.2 86 62.8
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 7.6e-19 97.1 71 70.4
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 7.6e-19 97.1 84 64.3
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.4e-17 92.8 66 77.3
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 2.5e-17 92.0 64 75.0
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 3.2e-17 91.7 83 60.2
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 3.2e-17 91.7 77 66.2
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 3.2e-17 91.7 85 57.6
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 7.2e-17 90.5 85 67.1
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.1e-16 89.0 77 68.8
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.7e-16 88.6 79 67.1
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 6.1e-16 87.4 63 74.6
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 7.9e-16 87.0 85 63.5
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.7e-15 84.0 58 75.9
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 5.7e-14 80.9 66 68.2
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 1.2e-11 73.2 52 71.2
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.2e-11 73.2 75 58.7
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.6e-11 72.0 95 48.4
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 2.2e-10 68.9 85 50.6
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.4e-09 66.2 91 54.9
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 1.4e-09 66.2 74 48.6
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 4.2e-09 64.7 58 60.3
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 3.3e-06 55.1 38 73.7
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 4.4e-06 54.7 74 40.5


User provided reference genes

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