Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 6.5e-279 963.4 473 100.0
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.3e-234 816.2 483 83.4
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.3e-234 813.5 483 83.2
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.1e-233 813.1 483 83.2
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.2e-233 811.6 483 83.2
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.6e-232 809.3 483 82.6
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.6e-232 809.3 483 82.8
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.3e-231 805.4 483 81.4
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 9.5e-230 800.0 484 82.2
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 3.6e-229 798.1 483 81.2
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 4.7e-229 797.7 483 81.4
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 2.3e-228 795.4 483 82.0
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 8.9e-228 793.5 481 81.1
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.2e-227 793.1 483 81.4
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.7e-226 789.3 487 80.1
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 6.4e-226 787.3 483 80.1
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.9e-225 785.8 482 80.3
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 4.1e-225 784.6 483 80.1
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 5.4e-225 784.3 483 79.9
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 5.4e-225 784.3 483 79.9
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 9.2e-225 783.5 482 80.3
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.2e-224 783.1 483 79.3
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.2e-224 783.1 483 81.0
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 2.7e-224 781.9 482 79.5
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 3.5e-224 781.6 485 80.2
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.3e-223 779.6 482 80.5
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.3e-223 779.6 482 80.5
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 2.3e-223 778.9 483 78.9
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.5e-222 776.2 482 79.0
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.3e-222 773.9 477 79.9
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.3e-222 773.9 477 79.9
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 7.3e-222 773.9 484 78.7
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.1e-221 772.3 482 79.5
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 4.7e-221 771.2 481 79.6
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 4.7e-221 771.2 485 78.1
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 8.1e-221 770.4 484 78.5
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.8e-220 769.2 485 78.4
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 3.1e-220 768.5 484 78.1
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 5.2e-220 767.7 482 79.5
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 6.8e-220 767.3 482 78.6
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 8.9e-220 766.9 482 79.5
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 1.5e-219 766.1 484 77.7
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 2.6e-219 765.4 485 79.2
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 7.6e-219 763.8 482 78.2
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 3.8e-218 761.5 481 78.0
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.9e-218 761.1 484 78.7
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.9e-218 761.1 484 78.7
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 8.4e-218 760.4 484 78.3
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 8.4e-218 760.4 483 78.1
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.1e-217 760.0 485 79.0
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 1.4e-217 759.6 479 77.7
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.4e-217 759.6 483 77.2
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 2.4e-217 758.8 485 77.3
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.4e-217 758.8 483 78.7
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.1e-217 758.1 492 76.8
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 4.1e-217 758.1 492 77.4
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.4e-217 757.7 484 77.3
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 5.4e-217 757.7 481 78.0
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 9.2e-217 756.9 483 78.7
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.6e-216 756.1 483 76.8
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 2.1e-216 755.7 484 77.7
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.7e-216 755.4 450 81.6
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 2.7e-216 755.4 481 77.3
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 4.6e-216 754.6 475 78.5
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 6.0e-216 754.2 474 78.7
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.0e-215 751.9 482 77.2
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 5.1e-215 751.1 478 78.0
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 6.6e-215 750.7 484 75.8
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 3.3e-214 748.4 485 76.9
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 3.3e-214 748.4 514 73.9
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 3.6e-213 745.0 411 86.4
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 8.1e-213 743.8 478 75.5
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.4e-212 743.0 475 75.8
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.8e-212 742.7 478 77.2
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.8e-212 742.7 478 76.2
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 6.9e-212 740.7 478 75.9
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 6.9e-212 740.7 483 76.8
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.2e-211 740.0 478 76.4
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 2.0e-211 739.2 484 76.7
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 5.8e-211 737.6 478 76.2
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 9.9e-211 736.9 478 76.8
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 2.9e-210 735.3 478 76.2
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.9e-209 732.6 478 75.1
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 3.2e-209 731.9 476 75.2
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 9.3e-209 730.3 479 75.2
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 7.8e-208 727.2 480 75.0
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 7.8e-208 727.2 474 77.4
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 8.7e-207 723.8 393 87.0
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.9e-206 722.6 486 75.5
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.9e-206 722.6 486 75.5
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.9e-206 722.6 393 87.0
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.5e-206 722.2 396 86.4
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 3.3e-206 721.8 396 86.4
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 3.3e-206 721.8 394 86.5
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 4.3e-206 721.5 394 86.3
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 5.6e-206 721.1 394 86.5
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 1.4e-204 716.5 486 74.9
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.1e-204 715.3 442 79.9
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.2e-203 713.4 393 86.0
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.8e-199 699.5 406 80.8
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 3.4e-195 685.3 441 76.4
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.1e-193 680.2 413 78.7
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 4.6e-192 674.9 415 76.1
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.5e-190 669.8 389 81.0
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 2.5e-190 669.1 399 78.9
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 1.2e-187 660.2 394 80.7
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 2.1e-176 622.9 406 72.7
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 2.5e-174 615.9 383 78.6
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.2e-169 598.6 430 71.6
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 2.3e-167 592.8 389 69.2
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.8e-164 583.2 481 64.0
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 1.0e-162 577.4 400 65.0
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.0e-154 550.8 289 91.3
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 8.0e-152 541.2 289 88.6
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 5.0e-138 495.4 273 84.2
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.5e-137 493.8 336 72.3
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-99 367.5 237 75.5
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 7.8e-99 365.2 258 72.1
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.1e-80 302.0 172 82.0
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.7e-61 241.1 196 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 8.5e-61 238.8 130 87.7
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-59 234.6 135 84.4
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 5.1e-58 229.6 139 79.1
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 3.7e-48 196.8 140 73.6
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 4.1e-39 166.8 158 58.2
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.2e-35 155.2 94 81.9
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 7.0e-31 139.4 105 65.7
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 2.3e-13 81.3 59 66.1
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 1.3e-08 65.5 127 32.3
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 3.7e-08 63.9 131 35.1
Oeu029778.1 Olea europaea HOM05D000776 ORTHO05D001624 3.7e-08 63.9 166 27.7
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.1e-07 62.4 156 30.1
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.9e-07 61.6 162 29.0
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 4.1e-07 60.5 161 26.7
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 7.0e-07 59.7 142 32.4
Nn2g15146 Nelumbo nucifera HOM05D000776 ORTHO05D001624 7.0e-07 59.7 128 31.2
Ciclev10001690m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.6e-06 58.5 280 24.6
FAN08G0150 Fragaria x ananassa HOM05D000776 ORTHO05D001624 3.5e-06 57.4 137 27.0


User provided reference genes

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