Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 3.7e-241 837.8 429 100.0
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 2.6e-186 655.6 427 77.0
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 5.0e-185 651.4 424 75.9
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 1.2e-183 646.7 436 75.0
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 1.6e-183 646.4 434 75.8
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 1.5e-181 639.8 424 74.1
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 2.0e-181 639.4 428 75.2
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 3.3e-181 638.6 431 72.9
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 2.8e-180 635.6 423 74.0
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 4.8e-180 634.8 422 74.4
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.8e-179 632.9 427 73.1
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 9.1e-179 630.6 428 73.4
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 9.1e-179 630.6 410 77.6
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.0e-178 629.4 419 75.2
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 2.0e-178 629.4 425 74.8
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 4.5e-178 628.2 433 71.4
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 1.3e-177 626.7 425 73.4
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 3.8e-177 625.2 423 74.9
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 5.0e-177 624.8 407 77.9
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 6.5e-177 624.4 431 70.8
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 8.5e-177 624.0 419 74.9
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.1e-176 623.6 428 74.1
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.9e-176 622.9 408 75.2
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 3.2e-176 622.1 428 72.4
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 5.5e-176 621.3 430 71.2
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.6e-175 619.8 429 71.1
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 3.6e-175 618.6 427 73.3
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 6.1e-175 617.8 423 70.7
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 7.9e-175 617.5 431 71.5
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 1.4e-174 616.7 431 71.5
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 3.9e-174 615.1 428 71.7
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 8.8e-174 614.0 425 70.1
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 8.8e-174 614.0 432 71.1
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 1.1e-173 613.6 433 70.9
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 2.6e-173 612.5 431 71.0
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 9.7e-173 610.5 430 70.0
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 1.3e-172 610.1 427 71.4
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.7e-172 609.8 434 71.2
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 3.7e-172 608.6 425 72.5
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 1.1e-171 607.1 449 69.3
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 1.1e-171 607.1 423 73.5
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 1.8e-171 606.3 426 70.7
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.8e-171 606.3 413 72.4
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.1e-171 605.5 433 72.3
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 3.1e-171 605.5 419 71.8
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 5.3e-171 604.7 415 72.5
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 5.3e-171 604.7 427 70.0
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.2e-170 603.6 425 71.5
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 2.0e-170 602.8 417 72.9
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 2.0e-170 602.8 425 69.4
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.6e-170 602.4 423 72.3
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 2.6e-170 602.4 404 72.5
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 4.5e-170 601.7 435 70.1
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 1.0e-169 600.5 417 71.2
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 2.9e-169 599.0 427 70.5
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 6.5e-169 597.8 421 70.3
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.1e-168 597.0 417 71.5
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 1.1e-168 597.0 408 71.1
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 4.2e-168 595.1 391 74.7
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 4.2e-168 595.1 425 69.2
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 2.1e-167 592.8 398 72.6
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 1.8e-166 589.7 432 69.7
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 1.5e-165 586.6 422 69.7
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 4.4e-165 585.1 418 69.4
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 7.4e-165 584.3 390 74.9
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.7e-164 583.2 486 62.3
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 4.8e-164 581.6 384 74.0
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 1.1e-163 580.5 417 69.1
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 7.0e-163 577.8 405 70.9
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 7.7e-162 574.3 426 68.1
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 6.5e-161 571.2 412 70.1
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 6.5e-161 571.2 417 69.3
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 3.2e-160 568.9 417 68.6
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 7.2e-160 567.8 417 68.8
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 1.6e-159 566.6 407 68.3
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 3.6e-159 565.5 444 65.1
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 4.7e-159 565.1 500 58.8
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 6.1e-159 564.7 419 67.3
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.4e-158 563.5 428 64.0
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 4.1e-155 552.0 412 67.7
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 9.1e-155 550.8 407 66.8
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 4.5e-154 548.5 428 65.4
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 1.3e-153 547.0 427 64.4
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 2.9e-153 545.8 403 67.7
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 5.5e-152 541.6 376 73.7
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 6.1e-151 538.1 406 66.7
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 6.1e-151 538.1 406 66.7
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 1.4e-150 537.0 360 75.8
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 1.5e-149 533.5 372 71.5
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 1.4e-147 526.9 384 65.9
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.0e-141 506.5 369 72.6
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 4.4e-141 505.4 408 60.5
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 3.7e-140 502.3 398 62.3
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 2.7e-138 496.1 318 78.3
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 2.4e-131 473.0 392 60.7
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 1.2e-125 454.1 383 60.6
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 5.8e-125 451.8 320 70.0
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 6.4e-124 448.4 407 57.5
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.3e-116 424.1 408 54.7
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 4.1e-115 419.1 311 68.5
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 3.4e-109 399.4 391 54.5
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 1.3e-108 397.5 299 65.6
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 8.4e-108 394.8 371 61.7
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.7e-100 370.5 252 76.2
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.7e-97 360.5 331 63.1
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 5.4e-91 339.0 388 47.2
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.3e-87 327.8 227 76.7
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 1.4e-86 324.3 218 77.1
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 5.8e-85 318.9 209 73.7
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 2.5e-75 287.0 379 45.1
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 2.4e-62 243.8 388 38.9
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 8.5e-52 208.8 144 71.5
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.2e-51 206.8 120 82.5
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.3e-47 194.9 112 83.0
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.7e-44 184.5 128 70.3
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.5e-43 180.6 128 69.5
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 8.0e-42 175.6 128 67.2
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.0e-36 156.4 104 78.8
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 1.5e-32 144.8 117 60.7
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 6.3e-31 139.4 100 66.0
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 1.8e-30 137.9 100 65.0
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 8.0e-26 122.5 89 65.2
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 4.9e-23 113.2 89 64.0
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 2.0e-21 107.8 86 59.3
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 2.7e-21 107.5 100 61.0
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 5.9e-21 106.3 72 61.1
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 3.9e-20 103.6 124 47.6
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 2.8e-18 97.4 126 46.0
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 1.0e-17 95.5 49 85.7
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 4.4e-16 90.1 243 35.8
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 2.0e-13 81.3 51 76.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 1.5e-11 75.1 41 73.2
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 2.8e-10 70.9 41 78.0


User provided reference genes

Program Settings