Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 1.1e-147 526.6 259 100.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 1.0e-108 397.1 235 80.0
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.3e-108 396.7 239 81.6
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.4e-105 386.7 249 77.5
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.8e-105 386.3 236 79.2
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 4.0e-105 385.2 249 77.1
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 6.8e-105 384.4 253 77.1
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.5e-104 383.3 249 76.7
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.5e-104 383.3 224 81.2
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.6e-104 382.5 259 74.9
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 3.4e-104 382.1 254 75.6
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.9e-103 379.0 243 76.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 3.7e-103 378.6 239 79.1
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 4.9e-103 378.3 254 74.4
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 8.3e-103 377.5 225 80.4
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 8.3e-103 377.5 236 80.1
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 1.1e-102 377.1 258 75.6
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.4e-102 376.7 253 74.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.9e-102 376.3 259 71.4
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.9e-102 376.3 240 76.7
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.4e-102 375.9 235 77.9
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 3.2e-102 375.6 250 78.4
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 4.1e-102 375.2 243 74.5
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 4.1e-102 375.2 260 73.8
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 5.4e-102 374.8 260 73.1
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 5.4e-102 374.8 255 73.7
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 9.2e-102 374.0 243 77.0
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 4.6e-101 371.7 242 74.0
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.3e-100 370.2 256 73.8
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.3e-100 370.2 240 75.8
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 6.6e-100 367.9 202 84.2
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 8.6e-100 367.5 256 74.2
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.5e-99 366.7 291 67.0
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.9e-99 366.3 199 84.9
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 3.3e-99 365.5 207 84.1
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 7.3e-99 364.4 225 78.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 9.5e-99 364.0 241 74.7
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 9.5e-99 364.0 193 87.6
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.6e-98 363.2 223 78.0
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 1.6e-98 363.2 256 71.9
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.6e-98 363.2 239 74.5
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 2.8e-98 362.5 259 71.8
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 3.6e-98 362.1 240 75.8
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.1e-97 360.5 243 75.3
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.8e-97 359.8 220 77.3
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.2e-96 357.1 203 82.3
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 4.4e-96 355.1 258 70.5
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 7.6e-96 354.4 238 73.5
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 9.9e-96 354.0 246 72.0
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 9.9e-96 354.0 225 76.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.7e-95 353.2 236 73.3
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 2.2e-95 352.8 249 70.7
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 3.8e-95 352.1 209 78.9
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 6.4e-95 351.3 257 71.2
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.4e-94 350.1 238 73.5
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.9e-94 349.7 226 76.1
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.9e-94 349.7 245 71.0
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 5.4e-94 348.2 245 70.6
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 5.4e-94 348.2 219 75.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 7.1e-94 347.8 251 70.5
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 9.2e-94 347.4 257 69.6
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 9.2e-94 347.4 232 74.1
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 2.1e-93 346.3 196 83.2
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 6.0e-93 344.7 196 82.1
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 7.8e-93 344.4 256 69.1
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.3e-92 343.6 194 82.5
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 5.1e-92 341.7 245 71.4
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 6.6e-92 341.3 248 69.0
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 2.5e-91 339.3 195 81.5
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.5e-91 339.3 238 70.2
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 3.3e-91 339.0 250 68.4
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 4.3e-91 338.6 255 68.2
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.4e-89 333.6 190 82.6
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 9.0e-89 330.9 245 68.6
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 9.0e-89 330.9 222 70.3
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 7.6e-88 327.8 193 77.7
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 2.2e-87 326.2 234 70.1
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 5.4e-86 321.6 231 70.6
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 1.6e-85 320.1 225 72.0
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 2.1e-85 319.7 212 75.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 3.5e-85 318.9 214 72.9
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 1.5e-83 313.5 192 77.6
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 4.8e-82 308.5 197 77.2
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.4e-81 307.0 190 74.2
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 5.3e-81 305.1 248 66.1
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 6.4e-79 298.1 244 64.8
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 1.4e-78 297.0 194 75.3
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.9e-78 296.6 195 70.3
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 7.1e-78 294.7 191 71.2
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 1.8e-73 280.0 183 70.5
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.4e-73 279.6 174 70.7
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 7.6e-72 274.6 191 70.2
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 8.4e-71 271.2 266 57.9
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 6.7e-68 261.5 199 65.3
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 6.9e-65 251.5 148 79.1
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 3.8e-63 245.7 182 68.7
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 9.3e-62 241.1 230 58.3
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.5e-61 239.2 230 58.3
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 5.9e-56 221.9 137 78.1
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.7e-55 220.3 173 61.3
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 2.1e-53 213.4 235 51.5
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.3e-50 204.1 195 52.3
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 1.9e-46 190.3 200 54.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 2.5e-46 189.9 151 64.9
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 7.0e-41 171.8 149 53.7
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.2e-40 171.0 103 75.7
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 8.5e-39 164.9 105 76.2
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 4.4e-27 125.9 225 39.6
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 7.5e-27 125.2 71 84.5
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.8e-25 120.6 79 72.2
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 1.7e-15 87.4 59 67.8


User provided reference genes

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