Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1095 Cannabis sativa HOM05D006661 ORTHO05D008369 1.2e-49 199.5 97 100.0
CANSAT25G2346 Cannabis sativa HOM05D006661 ORTHO05D008369 3.8e-48 194.5 96 97.9
CANSAT78G0664 Cannabis sativa HOM05D006661 ORTHO05D008369 1.4e-47 192.6 97 96.9
Eucgr.H03073 Eucalyptus grandis HOM05D006661 ORTHO05D008369 1.3e-45 186.0 96 90.6
Lj4g0006609 Lotus japonicus HOM05D006661 ORTHO05D008369 3.9e-45 184.5 96 90.6
SalBow4G0568 Salvia bowleyana HOM05D006661 ORTHO05D008369 1.9e-44 182.2 96 88.5
CsaV3_2G025680 Cucumis sativus L. HOM05D006661 ORTHO05D008369 3.3e-44 181.4 96 88.5
ClCG08G016930 Citrullus lanatus HOM05D006661 ORTHO05D008369 5.6e-44 180.6 96 88.5
Sed0008959 Sechium edule HOM05D006661 ORTHO05D008369 5.6e-44 180.6 96 88.5
Cfa017936 Carpinus fangiana HOM05D006661 ORTHO05D008369 7.3e-44 180.3 96 88.5
Sp4g05860 Schrenkiella parvula HOM05D006661 ORTHO05D008369 7.3e-44 180.3 96 87.5
Psat1g192360 Pisum sativum HOM05D006661 ORTHO05D008369 9.6e-44 179.9 96 87.5
TPR.G20633 Trifolium pratense HOM05D006661 ORTHO05D008369 9.6e-44 179.9 96 87.5
Ca_00502_v3 Cicer arietinum L. HOM05D006661 ORTHO05D008369 1.2e-43 179.5 96 87.5
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea HOM05D006661 ORTHO05D008369 1.6e-43 179.1 96 87.5
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea HOM05D006661 ORTHO05D008369 1.6e-43 179.1 96 87.5
Haze_18212 Corylus avellana HOM05D006661 ORTHO05D008369 1.6e-43 179.1 97 87.6
Glyma.13G222200 Glycine max HOM05D006661 ORTHO05D008369 1.6e-43 179.1 96 87.5
Cpa.g.sc7.195 Carica papaya HOM05D006661 ORTHO05D008369 2.1e-43 178.7 96 88.5
Gohir.D06G089000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 2.8e-43 178.3 96 87.5
Gorai.010G102800 Gossypium raimondii HOM05D006661 ORTHO05D008369 2.8e-43 178.3 96 87.5
AT2G25950 Arabidopsis thaliana HOM05D006661 ORTHO05D008369 3.6e-43 177.9 97 87.6
A04p20170 Brassica napus HOM05D006661 ORTHO05D008369 3.6e-43 177.9 97 87.6
BraA04t17597Z Brassica rapa HOM05D006661 ORTHO05D008369 3.6e-43 177.9 97 87.6
Medtr2g018310 Medicago truncatula HOM05D006661 ORTHO05D008369 3.6e-43 177.9 96 86.5
Nitab4.5_0000359g0060 Nicotiana tabacum HOM05D006661 ORTHO05D008369 3.6e-43 177.9 96 85.4
AL4G18030 Arabidopsis lyrata HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
BcaB06g29613 Brassica carinata HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
BcaC02g08315 Brassica carinata HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
C04p55870 Brassica napus HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
BolC4t27119H Brassica oleracea HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
Thhalv10002098m.g Eutrema salsugineum HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
Hund03354 Selenicereus undatus HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 86.5
TWI34G0500 Tripterygium wilfordii HOM05D006661 ORTHO05D008369 4.7e-43 177.6 96 87.5
PGR031G2394 Punica granatum HOM05D006661 ORTHO05D008369 6.2e-43 177.2 96 85.4
Gohir.A06G090000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 8.1e-43 176.8 96 86.5
Aa31LG5G9740 Aethionema arabicum HOM05D006661 ORTHO05D008369 1.1e-42 176.4 96 86.5
CSS0024744 Camellia sinensis var. sinensis HOM05D006661 ORTHO05D008369 1.1e-42 176.4 96 84.4
Migut.A00149 Erythranthe guttata HOM05D006661 ORTHO05D008369 1.1e-42 176.4 96 85.4
Thecc.09G051500 Theobroma cacao HOM05D006661 ORTHO05D008369 1.1e-42 176.4 96 86.5
vmacro00160 Vaccinium macrocarpon HOM05D006661 ORTHO05D008369 1.4e-42 176.0 96 84.4
Carub.0004s0581 Capsella rubella HOM05D006661 ORTHO05D008369 1.8e-42 175.6 96 85.4
CARHR287330 Cardamine hirsuta HOM05D006661 ORTHO05D008369 1.8e-42 175.6 96 86.5
SGA_v2.0_scaffold88G27220 Striga asiatica HOM05D006661 ORTHO05D008369 1.8e-42 175.6 96 85.4
Ciclev10009515m.g Citrus clementina HOM05D006661 ORTHO05D008369 2.4e-42 175.3 96 85.4
Duzib168G0126 Durio zibethinus HOM05D000575 ORTHO05D008369 2.4e-42 175.3 96 85.4
Duzib187G1697 Durio zibethinus HOM05D006661 ORTHO05D008369 2.4e-42 175.3 96 85.4
AUR62022048 Chenopodium quinoa HOM05D006661 ORTHO05D008369 3.1e-42 174.9 96 85.4
MELO3C030341.2 Cucumis melo HOM05D006661 ORTHO05D008369 3.1e-42 174.9 92 88.0
Peaxi162Scf00436g00823 Petunia axillaris HOM05D006661 ORTHO05D008369 3.1e-42 174.9 96 83.3
Potri.018G056100 Populus trichocarpa HOM05D006661 ORTHO05D008369 4.0e-42 174.5 96 84.4
QL02p001540 Quercus lobata HOM05D006661 ORTHO05D008369 4.0e-42 174.5 96 85.4
MSTRG.11669 Avicennia marina HOM05D006661 ORTHO05D008369 5.2e-42 174.1 96 83.3
Manes.16G078200 Manihot esculenta HOM05D006661 ORTHO05D008369 5.2e-42 174.1 96 84.4
Rhsim11G0046400 Rhododendron simsii HOM05D006661 ORTHO05D008369 5.2e-42 174.1 96 82.3
Atru.chr7.2017 Acer truncatum HOM05D006661 ORTHO05D008369 6.9e-42 173.7 96 85.4
CiPaw.16G029900 Carya illinoinensis HOM05D006661 ORTHO05D008369 6.9e-42 173.7 96 85.4
HanXRQChr09g0251201 Helianthus annuus HOM05D006661 ORTHO05D008369 6.9e-42 173.7 96 83.3
Oeu036347.1 Olea europaea HOM05D006661 ORTHO05D008369 6.9e-42 173.7 96 84.4
CAN.G6.20 Capsicum annuum HOM05D006661 ORTHO05D008369 9.0e-42 173.3 96 83.3
AUR62009178 Chenopodium quinoa HOM05D006661 ORTHO05D008369 9.0e-42 173.3 96 84.4
FvH4_2g32150 Fragaria vesca HOM05D006661 ORTHO05D008369 9.0e-42 173.3 96 83.3
FAN24G0958 Fragaria x ananassa HOM05D006661 ORTHO05D008369 9.0e-42 173.3 96 83.3
THA.LOC104803733 Tarenaya hassleriana HOM05D006661 ORTHO05D008369 9.0e-42 173.3 96 84.4
Actinidia01201 Actinidia chinensis HOM05D006661 ORTHO05D008369 2.0e-41 172.2 96 82.3
Aqoxy7G01325 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 2.0e-41 172.2 96 82.3
Lsat_1_v5_gn_6_13140 Lactuca sativa HOM05D006661 ORTHO05D008369 2.0e-41 172.2 96 83.3
Lalb_Chr18g0055101 Lupinus albus HOM05D006661 ORTHO05D008369 2.0e-41 172.2 96 82.3
Phvul.006G168200 Phaseolus vulgaris HOM05D006661 ORTHO05D008369 2.0e-41 172.2 96 83.3
Sabra06G0181100 Salix brachista HOM05D006661 ORTHO05D008369 2.0e-41 172.2 96 82.3
FAN15G2916 Fragaria x ananassa HOM05D006661 ORTHO05D008369 2.6e-41 171.8 96 83.3
FAN20G2753 Fragaria x ananassa HOM05D006661 ORTHO05D008369 2.6e-41 171.8 96 83.3
Lj8A552G6 Lonicera japonica HOM05D006661 ORTHO05D008369 2.6e-41 171.8 97 83.5
RcHm_v2.0_Chr6g0310531 Rosa chinensis HOM05D006661 ORTHO05D008369 2.6e-41 171.8 96 83.3
ECA233G6145 Erigeron canadensis HOM05D006661 ORTHO05D008369 3.4e-41 171.4 96 82.3
PSO063G2325 Papaver somniferum HOM05D006661 ORTHO05D008369 4.4e-41 171.0 96 81.2
VMungo0540G1431 Vigna mungo HOM05D006661 ORTHO05D008369 4.4e-41 171.0 96 82.3
Solyc08g065640.3 Solanum lycopersicum HOM05D006661 ORTHO05D008369 5.8e-41 170.6 96 83.3
Sopen08g019360 Solanum pennellii HOM05D006661 ORTHO05D008369 5.8e-41 170.6 96 83.3
PGSC0003DMG400002199 Solanum tuberosum HOM05D006661 ORTHO05D008369 5.8e-41 170.6 96 83.3
GSVIVG01035347001 Vitis vinifera HOM05D006661 ORTHO05D008369 5.8e-41 170.6 96 82.3
FAN27G1843 Fragaria x ananassa HOM05D006661 ORTHO05D008369 9.9e-41 169.9 95 83.2
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 1.3e-40 169.5 96 81.2
Cc08_g10380 Coffea canephora HOM05D006661 ORTHO05D008369 1.7e-40 169.1 96 81.2
unitig_748.g7518 Utricularia gibba HOM05D006661 ORTHO05D008369 1.7e-40 169.1 96 81.2
DCAR_003069 Daucus carota HOM05D006661 ORTHO05D008369 6.4e-40 167.2 95 77.9
Nitab4.5_0001179g0020 Nicotiana tabacum HOM05D006661 ORTHO05D008369 8.4e-40 166.8 96 83.3
Os01g0559000 Oryza sativa ssp. japonica HOM05D006661 ORTHO05D008369 1.1e-39 166.4 96 80.2
MD08G1044700 Malus domestica HOM05D006661 ORTHO05D008369 2.4e-39 165.2 96 79.2
PSO832G3146 Papaver somniferum HOM05D006661 ORTHO05D008369 2.4e-39 165.2 96 78.1
Prupe.1G414600 Prunus persica HOM05D006661 ORTHO05D008369 2.4e-39 165.2 96 79.2
ATR0789G168 Amborella trichopoda HOM05D006661 ORTHO05D008369 3.2e-39 164.9 96 78.1
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 4.2e-39 164.5 93 80.6
Nn6g35396 Nelumbo nucifera HOM05D006661 ORTHO05D008369 7.1e-39 163.7 96 77.1
TAR383G0029 Trochodendron aralioides HOM05D006661 ORTHO05D008369 1.6e-38 162.5 96 78.1
CDE07G0448 Ceratophyllum demersum HOM05D006661 ORTHO05D008369 2.7e-38 161.8 96 75.0
Zm00001eb162230 Zea mays HOM05D006661 ORTHO05D008369 3.5e-38 161.4 96 77.1
EL10Ac2g03924 Beta vulgaris HOM05D006661 ORTHO05D008369 6.0e-38 160.6 101 77.2
HPP92_005507 Vanilla planifolia HOM05D006661 ORTHO05D008369 1.5e-36 156.0 96 70.8
SEGI_00170 Sequoiadendron giganteum HOM05D006661 ORTHO05D008369 9.6e-36 153.3 96 71.9
Aqoxy6G02410 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 2.4e-31 138.7 96 70.8
Pp3c22_18330 Physcomitrium patens HOM05D006661 ORTHO05D008369 2.4e-31 138.7 96 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis HOM05D006661 ORTHO05D008369 1.8e-29 132.5 96 64.6
SMO169G0297 Selaginella moellendorffii HOM05D006661 ORTHO05D008369 3.9e-29 131.3 97 61.9
CBR_g22258 Chara braunii HOM05D006661 ORTHO05D008369 5.1e-29 131.0 96 61.5
QL02p001525 Quercus lobata HOM05D006661 ORTHO05D008369 6.7e-29 130.6 82 74.4
MCO14G523 Micromonas commoda HOM05D006661 ORTHO05D008369 3.4e-17 91.7 88 46.6
PRCOL_00000611 Prasinoderma coloniale HOM05D006661 ORTHO05D008369 2.5e-15 85.5 98 42.9
Cre02.g110450 Chlamydomonas reinhardtii HOM05D006661 ORTHO05D008369 2.8e-11 72.0 97 39.2
Sc23g0005520 Simmondsia chinensis HOM05D006661 ORTHO05D008369 1.8e-10 69.3 39 84.6
Sabra06G0180500 Salix brachista HOM05D006661 ORTHO05D008369 1.0e-08 63.5 39 74.4


User provided reference genes

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