Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 4.5e-135 484.6 241 100.0
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 1.1e-104 383.6 236 78.0
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 2.3e-102 375.9 238 76.5
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 8.6e-102 374.0 241 76.8
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.5e-101 373.2 242 76.0
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 2.5e-101 372.5 240 74.6
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 7.3e-101 370.9 242 74.4
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 9.5e-101 370.5 240 76.7
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.6e-100 369.8 240 75.4
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 2.1e-100 369.4 248 74.2
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.8e-100 369.0 234 78.6
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 6.2e-100 367.9 243 74.5
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-99 366.7 243 75.3
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.1e-99 365.5 243 75.3
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 4.0e-99 365.2 239 74.5
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.2e-99 364.8 243 75.3
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 8.9e-99 364.0 243 74.9
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.2e-98 363.6 246 74.0
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.2e-98 363.6 243 74.5
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 3.4e-98 362.1 247 71.7
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 5.8e-98 361.3 243 74.5
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 9.8e-98 360.5 239 74.1
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.8e-98 360.5 243 74.9
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 1.3e-97 360.1 244 73.4
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.7e-97 359.8 238 75.2
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 6.4e-97 357.8 241 72.2
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.1e-96 357.1 238 72.3
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 1.4e-96 356.7 241 72.2
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 3.2e-96 355.5 245 72.2
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.1e-96 355.1 236 74.6
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 5.4e-96 354.8 248 71.0
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.6e-95 353.2 245 71.8
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-95 353.2 247 72.5
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 1.6e-95 353.2 238 73.9
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 4.6e-95 351.7 237 75.5
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.0e-95 351.3 247 72.1
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.3e-94 350.1 246 70.3
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.7e-94 349.7 234 72.6
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 3.0e-94 349.0 246 71.1
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 3.9e-94 348.6 242 71.9
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.5e-93 346.7 221 75.1
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.9e-93 346.3 243 72.0
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.9e-93 346.3 221 75.6
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 2.5e-93 345.9 228 75.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.3e-93 345.5 234 72.2
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 5.6e-93 344.7 232 73.3
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 9.5e-93 344.0 223 74.9
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.2e-92 343.6 235 71.5
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 1.6e-92 343.2 236 71.6
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.1e-92 342.8 228 71.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 8.1e-92 340.9 236 71.2
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.1e-91 340.5 246 69.1
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.4e-91 340.1 234 70.9
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 5.2e-91 338.2 228 71.5
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 2.0e-90 336.3 304 59.2
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 2.0e-90 336.3 241 69.3
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 4.4e-90 335.1 240 70.8
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 5.8e-90 334.7 226 71.2
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 7.5e-90 334.3 236 69.5
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.8e-90 334.0 217 75.6
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 1.3e-89 333.6 225 71.6
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.2e-89 332.8 221 70.6
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 2.9e-89 332.4 223 72.2
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 2.9e-89 332.4 236 69.1
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 2.9e-89 332.4 236 67.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 2.9e-89 332.4 236 67.4
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.9e-89 331.6 228 70.2
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 4.9e-89 331.6 236 69.1
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 6.4e-89 331.3 223 71.7
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 3.2e-88 328.9 219 72.6
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 7.1e-88 327.8 233 70.4
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 7.1e-88 327.8 221 69.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 9.2e-88 327.4 239 67.8
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.6e-87 326.6 241 66.0
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.1e-87 326.2 217 74.2
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 3.5e-87 325.5 219 72.1
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.6e-87 325.1 245 67.8
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 4.6e-87 325.1 222 71.6
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.0e-86 322.4 216 72.2
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 5.1e-86 321.6 209 73.7
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 5.1e-86 321.6 229 69.9
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 5.1e-86 321.6 229 69.9
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 5.1e-86 321.6 229 69.9
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 5.1e-86 321.6 239 67.8
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 8.6e-86 320.9 219 71.2
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.1e-85 320.5 226 69.5
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 1.1e-85 320.5 199 77.4
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 4.3e-85 318.5 206 74.3
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 4.3e-85 318.5 231 68.4
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 4.3e-85 318.5 231 68.4
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 4.7e-84 315.1 228 68.0
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 6.8e-83 311.2 194 74.7
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.5e-82 310.1 194 78.9
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.0e-82 309.7 231 64.5
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 6.4e-81 304.7 223 65.9
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 1.4e-80 303.5 212 70.3
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.2e-80 302.4 194 74.7
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.5e-79 298.9 206 71.8
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 8.6e-78 294.3 216 66.2
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 3.3e-77 292.4 238 62.6
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 4.3e-77 292.0 237 61.6
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 7.3e-77 291.2 199 71.4
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 2.8e-76 289.3 183 76.0
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 5.1e-70 268.5 184 69.6
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 2.5e-69 266.2 225 57.8
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.8e-68 261.9 203 65.5
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.4e-67 260.4 203 63.5
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 6.4e-65 251.5 262 56.9
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 3.0e-62 242.7 226 54.0
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 1.1e-61 240.7 220 50.9
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.0e-59 232.3 144 77.8
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 3.4e-58 229.2 241 51.9
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 2.2e-57 226.5 141 78.7
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 1.9e-56 223.4 213 54.0
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 3.9e-54 215.7 184 59.8
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 3.7e-52 209.1 191 55.5
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.3e-49 200.7 133 73.7
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 9.4e-32 141.4 183 44.8
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 2.4e-27 126.7 209 38.8
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.8e-25 119.4 91 64.8
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 4.2e-24 115.9 254 31.1
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 6.7e-22 108.6 201 34.8
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 1.7e-20 104.0 183 37.7
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 4.7e-15 85.9 47 83.0
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 6.7e-14 82.0 60 63.3
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.3e-12 77.8 49 73.5
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 4.2e-08 62.8 34 79.4
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 1.0e-06 58.2 215 23.3


User provided reference genes

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