Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 9.1e-248 859.8 424 100.0
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.4e-160 569.3 416 69.0
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 2.4e-160 569.3 427 68.1
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 6.2e-156 554.7 420 66.0
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 1.2e-154 550.4 432 64.6
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 7.6e-154 547.7 426 64.6
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 2.1e-151 539.7 425 63.1
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 3.3e-149 532.3 416 63.5
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 4.3e-149 531.9 430 62.6
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 4.3e-149 531.9 423 63.1
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 3.7e-148 528.9 418 66.0
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 4.8e-148 528.5 416 63.0
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 4.1e-147 525.4 427 61.4
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.5e-146 523.5 421 61.5
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.0e-146 523.1 542 52.8
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 7.6e-146 521.2 410 64.6
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.3e-145 520.4 416 62.7
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 3.8e-145 518.8 412 64.3
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 8.5e-145 517.7 419 62.3
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 8.5e-145 517.7 421 64.1
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 8.5e-145 517.7 417 63.3
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 8.5e-145 517.7 424 62.7
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.4e-144 516.9 450 58.0
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 1.4e-142 510.4 431 58.5
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.8e-142 510.0 412 61.2
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.8e-142 510.0 420 63.1
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.1e-141 507.3 423 59.6
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 3.3e-141 505.8 420 59.8
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 1.4e-139 500.4 424 60.8
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 2.4e-139 499.6 418 59.8
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 5.3e-139 498.4 416 60.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 5.3e-139 498.4 418 60.0
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 3.4e-138 495.7 424 57.8
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 4.5e-138 495.4 429 59.9
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 1.3e-137 493.8 473 57.3
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 5.5e-136 488.4 428 57.9
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.2e-135 487.3 423 58.9
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 6.1e-135 485.0 417 59.5
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 7.9e-135 484.6 432 56.5
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 1.0e-134 484.2 420 57.6
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 3.0e-134 482.6 424 59.4
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 9.7e-133 477.6 427 57.4
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 6.3e-132 474.9 441 55.1
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 5.3e-131 471.9 438 55.9
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.5e-130 470.3 403 59.8
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 2.6e-130 469.5 429 56.2
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 3.4e-130 469.2 436 55.5
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.4e-130 469.2 456 54.2
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.4e-130 469.2 456 54.2
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 5.9e-130 468.4 429 56.2
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 1.7e-129 466.8 433 55.4
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.1e-128 464.2 428 55.6
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.2e-128 462.6 427 56.4
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 4.2e-128 462.2 462 52.8
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.6e-127 460.3 427 55.0
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.1e-127 459.9 379 62.0
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 6.1e-127 458.4 413 57.6
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 1.4e-126 457.2 414 55.1
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 2.3e-126 456.4 415 55.2
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 3.0e-126 456.1 413 54.7
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 3.0e-126 456.1 436 57.3
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 3.9e-126 455.7 375 62.7
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 8.8e-126 454.5 413 57.4
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.1e-125 454.1 413 56.7
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 1.1e-125 454.1 418 56.7
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 4.4e-125 452.2 415 54.9
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 2.2e-124 449.9 415 54.5
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 4.8e-124 448.7 440 51.8
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 4.8e-124 448.7 413 55.9
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 2.4e-123 446.4 414 55.3
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 2.0e-122 443.4 419 54.4
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 3.5e-122 442.6 436 53.9
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 4.5e-122 442.2 417 53.7
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 2.7e-119 433.0 424 51.7
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.4e-118 430.6 425 52.2
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.5e-117 427.2 333 63.4
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 2.8e-116 422.9 427 53.4
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 6.3e-116 421.8 379 57.8
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 3.2e-112 409.5 338 62.1
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 3.2e-112 409.5 406 50.2
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 4.4e-109 399.1 441 49.7
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.1e-107 394.4 433 50.1
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 7.0e-107 391.7 358 57.0
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 2.0e-106 390.2 424 47.6
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 7.7e-106 388.3 388 52.3
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 8.6e-105 384.8 350 56.9
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 6.1e-103 378.6 368 52.4
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.5e-101 374.0 451 47.0
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 3.1e-99 366.3 427 45.2
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 7.0e-99 365.2 361 56.2
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 7.5e-93 345.1 402 48.8
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.9e-88 330.5 419 42.2
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 7.3e-88 328.6 337 55.2
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.6e-87 326.2 435 43.7
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.7e-79 299.3 349 44.7
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 8.1e-79 298.5 285 49.1
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.8e-78 297.4 340 48.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 3.0e-65 253.4 288 46.2
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 1.3e-60 238.0 159 67.9
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 3.6e-55 219.9 190 52.6
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 9.0e-54 215.3 229 53.3
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.5e-53 214.5 235 52.3
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 3.8e-52 209.9 394 32.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 2.1e-42 177.6 176 48.9
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.1e-34 149.4 163 55.8
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.4e-25 121.7 160 46.2
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 7.4e-24 115.9 82 63.4
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.5e-21 108.2 152 46.7
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 3.7e-15 87.0 62 62.9
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 8.2e-15 85.9 272 25.0
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 8.5e-12 75.9 93 51.6
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.3e-09 67.8 65 53.8


User provided reference genes

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