Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0992 Cannabis sativa HOM05D002412 ORTHO05D002516 2.5e-103 379.0 223 100.0
CANSAT25G1695 Cannabis sativa HOM05D002412 ORTHO05D002516 1.1e-100 370.2 224 98.7
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 1.3e-19 100.9 222 44.1
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 1.7e-19 100.5 209 42.1
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 2.9e-19 99.8 228 38.6
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 8.4e-19 98.2 211 45.5
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 1.9e-18 97.1 214 40.2
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 1.6e-17 94.0 214 39.3
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 2.7e-17 93.2 226 37.6
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 5.1e-16 89.0 207 44.0
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 6.7e-16 88.6 211 40.3
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 1.6e-14 84.0 207 34.3
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.8e-14 83.2 221 35.3
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 2.8e-14 83.2 186 37.6
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 3.7e-14 82.8 222 34.2
Gohir.A12G019300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.8e-14 82.4 220 35.9
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 4.8e-14 82.4 219 32.4
Gohir.D12G019500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 8.1e-14 81.6 219 36.1
Gorai.008G019800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.1e-13 81.3 216 36.6
MSTRG.20224 Avicennia marina HOM05D002412 ORTHO05D002516 4.0e-13 79.3 225 37.3
FAN15G1641 Fragaria x ananassa HOM05D002412 ORTHO05D002516 4.0e-13 79.3 206 43.2
ECA236G2487 Erigeron canadensis HOM05D002412 ORTHO05D002516 6.9e-13 78.6 226 30.5
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 6.9e-13 78.6 226 33.2
Cpa.g.sc106.37 Carica papaya HOM05D002412 ORTHO05D002516 1.2e-12 77.8 92 53.3
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.5e-12 77.4 207 35.7
CAN.G606.66 Capsicum annuum HOM05D002412 ORTHO05D002516 1.5e-12 77.4 223 34.5
FAN24G3376 Fragaria x ananassa HOM05D002412 ORTHO05D002516 2.6e-12 76.6 224 44.6
RcHm_v2.0_Chr6g0252561 Rosa chinensis HOM05D002412 ORTHO05D002516 2.6e-12 76.6 216 43.1
FAN20G0615 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.4e-12 76.3 209 46.4
Potri.001G292100 Populus trichocarpa HOM05D002412 ORTHO05D002516 3.4e-12 76.3 213 39.4
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 5.8e-12 75.5 210 35.2
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 5.8e-12 75.5 200 34.0
Nitab4.5_0002040g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 5.8e-12 75.5 208 38.9
PSO675G0250 Papaver somniferum HOM05D002412 ORTHO05D002516 5.8e-12 75.5 84 56.0
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 5.8e-12 75.5 213 38.5
Ca_11030_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 7.6e-12 75.1 225 32.4
Glyma.20G135500 Glycine max HOM05D002412 ORTHO05D002516 1.0e-11 74.7 207 35.3
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 1.0e-11 74.7 206 35.4
VMungo1215G2231 Vigna mungo HOM05D002412 ORTHO05D002516 1.3e-11 74.3 205 35.6
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 1.7e-11 73.9 203 40.4
Sabra16G0182100 Salix brachista HOM05D002412 ORTHO05D002516 1.7e-11 73.9 220 40.0
Lj5g0012685 Lotus japonicus HOM05D002412 ORTHO05D002516 2.2e-11 73.6 226 34.1
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 2.9e-11 73.2 206 35.0
PSO541G5000 Papaver somniferum HOM05D002412 ORTHO05D002516 2.9e-11 73.2 84 54.8
Manes.10G084600 Manihot esculenta HOM05D002412 ORTHO05D002516 3.8e-11 72.8 211 45.0
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 4.9e-11 72.4 225 39.1
ClCG10G010090 Citrullus lanatus HOM05D002412 ORTHO05D002516 6.5e-11 72.0 218 42.2
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 6.5e-11 72.0 228 36.0
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 6.5e-11 72.0 218 31.7
Duzib132G0526 Durio zibethinus HOM05D002412 ORTHO05D002516 1.1e-10 71.2 194 49.5
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 1.4e-10 70.9 209 36.4
FvH4_2g03590 Fragaria vesca HOM05D002412 ORTHO05D002516 1.9e-10 70.5 204 42.6
Psat4g227320 Pisum sativum HOM05D002412 ORTHO05D002516 1.9e-10 70.5 204 31.9
Potri.009G086600 Populus trichocarpa HOM05D002412 ORTHO05D002516 1.9e-10 70.5 190 42.1
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 1.9e-10 70.5 218 30.3
TWI14G1286 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.9e-10 70.5 208 41.3
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.2e-10 69.7 218 33.9
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 4.2e-10 69.3 205 32.7
CSS0003834 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 5.5e-10 68.9 220 34.1
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 5.5e-10 68.9 217 34.1
MD10G1108100 Malus domestica HOM05D002412 ORTHO05D002516 7.1e-10 68.6 215 40.0
Lsat_1_v5_gn_7_84920 Lactuca sativa HOM05D002412 ORTHO05D002516 9.3e-10 68.2 217 41.5
Phvul.002G051300 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.6e-09 67.4 202 34.7
Phvul.007G046700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.6e-09 67.4 197 34.0
MD05G1102500 Malus domestica HOM05D002412 ORTHO05D002516 2.1e-09 67.0 218 38.1
Sed0010289 Sechium edule HOM05D002412 ORTHO05D002516 2.7e-09 66.6 209 34.4
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 2.7e-09 66.6 235 30.2
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 2.7e-09 66.6 207 32.4
Nitab4.5_0001185g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.5e-09 66.2 218 42.2
Peaxi162Scf00016g03017 Petunia axillaris HOM05D002412 ORTHO05D002516 3.5e-09 66.2 220 41.4
MSTRG.16674 Avicennia marina HOM05D002412 ORTHO05D002516 4.6e-09 65.9 221 35.3
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 4.6e-09 65.9 209 30.1
Sed0020406 Sechium edule HOM05D002412 ORTHO05D002516 4.6e-09 65.9 219 40.2
CiPaw.06G164900 Carya illinoinensis HOM05D002412 ORTHO05D002516 7.9e-09 65.1 208 40.9
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 1.0e-08 64.7 224 31.7
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 1.0e-08 64.7 226 30.5
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 1.0e-08 64.7 191 33.5
Dinv39215 Davidia involucrata HOM05D002412 ORTHO05D002516 1.3e-08 64.3 84 50.0
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 1.3e-08 64.3 217 26.3
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.8e-08 63.9 221 30.8
A01p04520 Brassica napus HOM05D002412 ORTHO05D002516 3.9e-08 62.8 210 31.0
PGSC0003DMG400025836 Solanum tuberosum HOM05D002412 ORTHO05D002516 3.9e-08 62.8 219 28.3
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 5.1e-08 62.4 221 29.9
BraA01t00437Z Brassica rapa HOM05D002412 ORTHO05D002516 6.7e-08 62.0 210 30.5
Psat6g214680 Pisum sativum HOM05D002412 ORTHO05D002516 6.7e-08 62.0 199 30.7
GSVIVG01009322001 Vitis vinifera HOM05D002412 ORTHO05D002516 6.7e-08 62.0 96 43.8
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 8.7e-08 61.6 221 29.9
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 8.7e-08 61.6 226 29.6
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 8.7e-08 61.6 233 28.3
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 8.7e-08 61.6 233 28.3
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 8.7e-08 61.6 209 30.6
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.1e-07 61.2 204 30.9
TPR.G21149 Trifolium pratense HOM05D002412 ORTHO05D002516 1.5e-07 60.8 231 30.3
AL7G17660 Arabidopsis lyrata HOM05D002412 ORTHO05D002516 1.9e-07 60.5 212 29.7
Carub.0007s0663 Capsella rubella HOM05D002412 ORTHO05D002516 1.9e-07 60.5 207 35.3
CiPaw.05G019200 Carya illinoinensis HOM05D002412 ORTHO05D002516 2.5e-07 60.1 114 43.0
Eucgr.I01046 Eucalyptus grandis HOM05D002412 ORTHO05D002516 3.3e-07 59.7 213 31.0
AT4G33800 Arabidopsis thaliana HOM05D002412 ORTHO05D002516 5.7e-07 58.9 207 32.4
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 5.7e-07 58.9 223 29.1
Actinidia34355 Actinidia chinensis HOM05D002412 ORTHO05D002516 7.4e-07 58.5 207 32.9
Lalb_Chr21g0308011 Lupinus albus HOM05D002412 ORTHO05D002516 7.4e-07 58.5 208 31.2
CARHR241890 Cardamine hirsuta HOM05D002412 ORTHO05D002516 9.6e-07 58.2 207 30.9
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 1.6e-06 57.4 221 28.5
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 2.1e-06 57.0 216 30.1
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 2.8e-06 56.6 195 35.9
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 3.7e-06 56.2 223 29.6
SalBow6G4199 Salvia bowleyana HOM05D002412 ORTHO05D002516 3.7e-06 56.2 211 28.4
Medtr1g106080 Medicago truncatula HOM05D002412 ORTHO05D002516 4.8e-06 55.8 210 29.0
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 6.3e-06 55.5 226 27.4
C01p04900 Brassica napus HOM05D002412 ORTHO05D002516 8.2e-06 55.1 211 30.8


User provided reference genes

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