Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 4.6e-92 341.3 181 100.0
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 2.3e-43 179.5 179 60.3
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.5e-42 176.8 173 62.4
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 3.4e-42 175.6 173 62.4
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 3.4e-42 175.6 180 60.6
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 4.9e-41 171.8 182 59.9
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 8.3e-41 171.0 179 60.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.1e-40 170.6 179 59.8
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.2e-39 167.2 181 57.5
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 4.5e-39 165.2 184 57.6
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.8e-39 164.5 181 56.4
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.3e-38 163.7 173 57.8
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.3e-38 163.7 173 57.8
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 3.9e-38 162.2 180 54.4
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 5.0e-38 161.8 173 59.0
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 8.6e-38 161.0 180 56.1
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 8.6e-38 161.0 183 55.7
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.1e-37 160.6 173 55.5
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.5e-37 159.5 186 55.9
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 3.3e-37 159.1 177 55.4
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 4.3e-37 158.7 178 56.2
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 4.3e-37 158.7 177 55.9
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.6e-36 156.8 172 55.8
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 1.6e-36 156.8 186 56.5
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.1e-36 156.4 183 54.1
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 4.7e-36 155.2 149 64.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 8.0e-36 154.5 180 55.6
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 4.0e-35 152.1 186 53.2
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 5.2e-35 151.8 191 51.3
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 6.8e-35 151.4 155 58.7
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 6.8e-35 151.4 177 55.4
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.9e-35 151.0 161 58.4
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 8.9e-35 151.0 177 53.7
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 8.9e-35 151.0 178 55.1
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.5e-34 150.2 116 73.3
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 2.0e-34 149.8 132 66.7
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.2e-33 146.4 163 61.3
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 2.9e-33 146.0 163 60.7
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 4.9e-33 145.2 166 54.2
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 6.4e-33 144.8 115 71.3
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 6.4e-33 144.8 179 54.2
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 6.4e-33 144.8 145 62.8
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 6.4e-33 144.8 115 72.2
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 8.3e-33 144.4 162 53.1
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.1e-32 144.1 127 66.9
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.4e-32 143.7 101 79.2
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.4e-32 143.7 177 55.4
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 2.4e-32 142.9 180 55.0
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 4.1e-32 142.1 185 53.5
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 5.4e-32 141.7 153 59.5
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 5.4e-32 141.7 177 51.4
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 7.0e-32 141.4 101 78.2
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 7.0e-32 141.4 128 64.1
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.2e-31 140.6 176 52.3
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.6e-31 140.2 160 58.1
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 2.7e-31 139.4 100 79.0
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 3.5e-31 139.0 134 63.4
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 3.5e-31 139.0 112 69.6
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.6e-31 138.7 161 54.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.6e-31 138.7 161 54.0
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 7.8e-31 137.9 100 78.0
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.3e-30 137.1 176 52.8
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 1.7e-30 136.7 133 59.4
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 3.9e-30 135.6 154 57.8
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 5.0e-30 135.2 140 60.0
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 6.6e-30 134.8 182 52.2
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 8.6e-30 134.4 179 52.0
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 8.6e-30 134.4 167 53.9
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 8.6e-30 134.4 88 80.7
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.1e-29 134.0 177 49.2
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 3.3e-29 132.5 102 73.5
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 3.3e-29 132.5 167 53.3
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 4.3e-29 132.1 177 45.8
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 7.3e-29 131.3 179 52.0
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 9.5e-29 131.0 157 55.4
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.2e-28 130.6 101 73.3
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.6e-28 130.2 177 49.2
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 2.1e-28 129.8 115 64.3
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-28 129.8 115 64.3
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.8e-28 129.4 176 51.1
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.7e-28 128.6 179 49.7
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 6.2e-28 128.3 86 82.6
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 8.0e-28 127.9 148 54.7
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 8.0e-28 127.9 148 54.7
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 8.0e-28 127.9 84 79.8
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.8e-27 126.7 92 73.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.8e-27 126.7 92 73.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.8e-27 126.7 92 73.9
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.8e-27 126.7 115 63.5
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.8e-27 126.7 115 63.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 2.3e-27 126.3 177 48.0
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 3.1e-27 125.9 178 50.0
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 5.2e-27 125.2 178 46.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 5.2e-27 125.2 118 57.6
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.8e-27 124.8 146 56.8
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 1.2e-26 124.0 86 76.7
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 4.4e-26 122.1 86 74.4
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-25 120.6 121 54.5
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 2.2e-25 119.8 134 59.7
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 8.3e-25 117.9 169 46.7
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.9e-24 116.7 179 45.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.4e-24 116.3 101 69.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.4e-24 116.3 179 45.8
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 6.0e-23 111.7 116 58.6
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.5e-21 107.1 85 67.1
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.5e-21 107.1 83 68.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.9e-21 106.7 83 67.5
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.6e-20 103.6 167 42.5
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 8.1e-20 101.3 83 67.5
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 2.3e-19 99.8 86 64.0
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 6.8e-19 98.2 65 80.0
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.3e-14 84.0 82 53.7
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.7e-14 83.6 120 45.8
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 5.6e-13 78.6 90 48.9
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.6e-12 77.0 88 53.4
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.0e-11 72.4 87 49.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.9e-10 67.8 95 49.5


User provided reference genes

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