Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 2.9e-177 625.2 324 100.0
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 2.9e-121 439.1 324 71.0
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 6.3e-116 421.4 321 69.8
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 7.0e-115 417.9 321 69.2
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 1.2e-114 417.2 322 68.9
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 5.9e-114 414.8 321 68.8
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 3.8e-113 412.1 321 67.9
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 6.5e-113 411.4 324 68.8
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 9.4e-112 407.5 320 67.5
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 2.1e-111 406.4 312 68.9
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 6.1e-111 404.8 319 66.8
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 6.1e-111 404.8 321 68.5
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 6.1e-111 404.8 322 66.5
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 8.0e-111 404.4 334 65.9
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.8e-110 403.3 321 67.3
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 4.0e-110 402.1 321 67.3
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 6.8e-110 401.4 321 67.3
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 6.8e-110 401.4 320 65.9
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 1.2e-109 400.6 321 66.4
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 1.2e-109 400.6 325 65.8
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.5e-109 400.2 321 67.3
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 2.0e-109 399.8 322 65.8
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 5.7e-109 398.3 320 67.5
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 7.5e-109 397.9 322 68.0
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 7.5e-109 397.9 319 65.5
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 2.2e-108 396.4 311 67.2
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 2.8e-108 396.0 321 66.7
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 3.7e-108 395.6 324 65.7
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.7e-108 395.6 324 65.7
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 4.8e-108 395.2 326 65.6
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 8.3e-108 394.4 320 65.6
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 2.4e-107 392.9 311 66.6
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 2.4e-107 392.9 314 65.9
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 4.1e-107 392.1 310 66.1
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 7.0e-107 391.3 320 63.8
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 1.2e-106 390.6 318 64.5
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 1.6e-106 390.2 321 63.6
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 2.0e-106 389.8 323 63.5
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 2.7e-106 389.4 324 63.6
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 4.5e-106 388.7 321 63.9
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 5.9e-106 388.3 320 65.0
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 7.7e-106 387.9 372 59.4
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 7.7e-106 387.9 321 65.7
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.3e-105 387.1 321 65.7
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 6.5e-105 384.8 321 65.4
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 1.9e-104 383.3 321 63.6
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 3.2e-104 382.5 321 62.3
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 1.6e-103 380.2 321 64.5
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 1.6e-103 380.2 321 62.6
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 8.0e-103 377.9 328 61.0
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.0e-102 375.9 321 62.9
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.5e-101 373.6 321 62.3
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 2.0e-101 373.2 321 63.2
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 7.5e-101 371.3 316 62.7
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.7e-100 370.2 321 62.6
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.7e-100 370.2 337 61.1
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 4.8e-100 368.6 323 62.5
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.4e-99 366.3 324 62.3
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 4.1e-99 365.5 360 58.6
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 5.4e-99 365.2 319 60.5
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 2.0e-98 363.2 318 60.1
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 4.5e-98 362.1 323 59.4
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 4.5e-98 362.1 316 61.7
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 3.8e-97 359.0 321 62.9
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 1.1e-96 357.5 331 59.8
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 5.5e-96 355.1 321 62.0
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 5.5e-96 355.1 380 53.2
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 7.2e-96 354.8 313 63.3
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 2.1e-95 353.2 320 60.9
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 2.1e-95 353.2 369 54.2
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 1.8e-94 350.1 321 61.4
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 2.3e-94 349.7 297 62.3
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 2.3e-94 349.7 321 61.7
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 3.0e-94 349.4 340 56.5
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 3.0e-94 349.4 321 60.7
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 1.2e-93 347.4 321 60.4
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 1.5e-93 347.1 321 61.1
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 9.8e-93 344.4 322 59.6
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 1.3e-92 344.0 323 59.8
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 1.3e-92 344.0 321 60.1
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 1.7e-92 343.6 321 59.8
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 2.8e-92 342.8 317 59.3
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 2.8e-92 342.8 323 59.1
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 2.8e-92 342.8 321 59.5
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 6.3e-92 341.7 323 60.1
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 8.3e-92 341.3 322 59.6
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 1.1e-91 340.9 321 59.5
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 1.1e-91 340.9 321 59.5
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 1.1e-91 340.9 321 59.5
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 1.4e-91 340.5 322 59.3
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 1.4e-91 340.5 317 58.4
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 2.4e-91 339.7 323 58.8
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 2.4e-91 339.7 323 58.8
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 3.2e-91 339.3 304 61.5
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 1.3e-89 334.0 345 56.5
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 5.0e-89 332.0 330 57.6
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 8.6e-89 331.3 298 60.1
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 1.1e-88 330.9 321 57.9
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 1.6e-87 327.0 316 55.7
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 1.0e-86 324.3 322 57.8
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 2.4e-83 313.2 268 62.3
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.0e-82 310.1 321 56.4
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 4.6e-82 308.9 318 56.3
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.3e-81 306.6 363 52.1
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 1.1e-80 304.3 257 63.8
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 1.9e-80 303.5 302 57.9
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 1.2e-79 300.8 315 53.7
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 2.8e-79 299.7 321 53.0
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 6.4e-76 288.5 207 73.4
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 9.5e-72 274.6 270 57.4
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.1e-70 271.2 321 50.5
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 2.0e-69 266.9 320 49.7
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 1.3e-68 264.2 318 48.4
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 4.3e-64 249.2 309 48.5
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 3.6e-63 246.1 274 50.0
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 4.7e-63 245.7 314 45.2
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 3.9e-49 199.5 323 39.9
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 2.4e-46 190.3 339 39.8
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.0e-46 189.5 272 44.9
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 6.9e-46 188.7 110 89.1
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 3.1e-38 163.3 175 47.4
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 2.6e-37 160.2 110 76.4
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.3e-36 157.9 105 77.1
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 7.1e-35 152.1 181 48.1
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 2.3e-33 147.1 135 61.5
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 1.6e-31 141.0 179 48.0
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 1.0e-25 121.7 176 43.2
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 1.2e-21 108.2 81 64.2
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 7.2e-19 99.0 98 55.1
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 3.6e-18 96.7 102 51.0
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 3.6e-18 96.7 342 29.5
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 7.9e-18 95.5 100 52.0
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 1.5e-13 81.3 46 89.1
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 1.5e-13 81.3 46 89.1
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 1.5e-13 81.3 46 89.1
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 7.7e-13 79.0 49 83.7
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 2.2e-12 77.4 45 86.7
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 2.9e-12 77.0 67 61.2
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 2.9e-12 77.0 54 70.4
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.8e-12 76.6 135 36.3
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 7.2e-11 72.4 53 67.9
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.2e-10 71.6 74 50.0
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 1.0e-09 68.6 83 44.6
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 5.7e-08 62.8 51 68.6
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 1.1e-06 58.5 50 52.0
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 3.1e-06 57.0 36 72.2


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