Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0849 Cannabis sativa HOM05D004702 ORTHO05D005505 5.5e-278 960.3 476 100.0
Thecc.08G002800 Theobroma cacao HOM05D004702 ORTHO05D005505 2.5e-177 625.9 476 67.4
Duzib093G1440 Durio zibethinus HOM05D004702 ORTHO05D005505 2.7e-176 622.5 476 66.6
Ciclev10001048m.g Citrus clementina HOM05D004702 ORTHO05D005505 1.8e-175 619.8 473 66.4
Duzib041G0633 Durio zibethinus HOM05D004702 ORTHO05D005505 1.7e-173 613.2 477 66.5
Manes.05G176200 Manihot esculenta HOM05D004702 ORTHO05D005505 2.2e-173 612.8 482 66.8
Gorai.009G214400 Gossypium raimondii HOM05D004702 ORTHO05D005505 2.4e-172 609.4 475 66.5
Gohir.A05G204600 Gossypium hirsutum HOM05D004702 ORTHO05D005505 7.0e-172 607.8 474 66.2
Gohir.D05G207800 Gossypium hirsutum HOM05D004702 ORTHO05D005505 7.0e-172 607.8 475 66.3
COL.COLO4_03654 Corchorus olitorius HOM05D004702 ORTHO05D005505 2.7e-171 605.9 488 64.5
Manes.18G040500 Manihot esculenta HOM05D004702 ORTHO05D005505 4.5e-171 605.1 469 67.2
Potri.002G123800 Populus trichocarpa HOM05D004702 ORTHO05D005505 1.2e-166 590.5 457 65.6
Potri.014G025000 Populus trichocarpa HOM05D004702 ORTHO05D005505 9.8e-166 587.4 456 65.8
Prupe.1G431800 Prunus persica HOM05D004702 ORTHO05D005505 1.3e-165 587.0 483 65.0
Sabra14G0017000 Salix brachista HOM05D004702 ORTHO05D005505 3.6e-160 568.9 475 62.3
Sabra02G0097200 Salix brachista HOM05D004702 ORTHO05D005505 1.4e-159 567.0 456 63.2
Eucgr.F00191 Eucalyptus grandis HOM05D004702 ORTHO05D005505 5.2e-159 565.1 433 64.4
TAR381G0178 Trochodendron aralioides HOM05D004702 ORTHO05D005505 5.2e-159 565.1 449 62.4
RcHm_v2.0_Chr6g0308391 Rosa chinensis HOM05D004702 ORTHO05D005505 5.7e-158 561.6 480 64.8
Dinv35933 Davidia involucrata HOM05D004702 ORTHO05D005505 1.7e-157 560.1 457 65.0
TAR376G0323 Trochodendron aralioides HOM05D004702 ORTHO05D005505 3.1e-156 555.8 467 61.9
TWI56G0769 Tripterygium wilfordii HOM05D004702 ORTHO05D005505 7.7e-155 551.2 439 64.7
FAN24G1074 Fragaria x ananassa HOM05D004702 ORTHO05D005505 4.3e-153 545.4 481 64.4
Cpa.g.sc21.167 Carica papaya HOM05D004702 ORTHO05D005505 7.3e-153 544.7 483 60.0
FAN15G1938 Fragaria x ananassa HOM05D004702 ORTHO05D005505 9.5e-153 544.3 479 64.5
FvH4_2g33990 Fragaria vesca HOM05D004702 ORTHO05D005505 1.6e-152 543.5 481 64.2
FAN20G1472 Fragaria x ananassa HOM05D004702 ORTHO05D005505 6.1e-152 541.6 479 64.9
MD15G1078600 Malus domestica HOM05D004702 ORTHO05D005505 1.2e-150 537.3 437 64.8
FAN27G2110 Fragaria x ananassa HOM05D004702 ORTHO05D005505 2.0e-150 536.6 479 64.3
MD08G1095800 Malus domestica HOM05D004702 ORTHO05D005505 3.4e-150 535.8 486 59.9
CSS0001222 Camellia sinensis var. sinensis HOM05D004702 ORTHO05D005505 3.9e-146 522.3 467 63.0
Glyma.06G042300 Glycine max HOM05D004702 ORTHO05D005505 5.6e-145 518.5 505 56.0
Actinidia22651 Actinidia chinensis HOM05D004702 ORTHO05D005505 3.6e-144 515.8 482 57.9
Cc10_g04740 Coffea canephora HOM05D004702 ORTHO05D005505 8.0e-144 514.6 483 56.9
VMungo1309G0408 Vigna mungo HOM05D004702 ORTHO05D005505 1.4e-143 513.8 491 56.6
Gohir.D06G019009 Gossypium hirsutum HOM05D004702 ORTHO05D005505 4.4e-142 508.8 407 64.9
Gorai.010G022200 Gossypium raimondii HOM05D004702 ORTHO05D005505 5.8e-142 508.4 479 57.6
Gohir.A06G020700 Gossypium hirsutum HOM05D004702 ORTHO05D005505 9.8e-142 507.7 407 65.6
Phvul.009G067000 Phaseolus vulgaris HOM05D004702 ORTHO05D005505 9.8e-142 507.7 486 56.8
Glyma.17G239800 Glycine max HOM05D004702 ORTHO05D005505 2.2e-141 506.5 484 56.0
CiPaw.15G053800 Carya illinoinensis HOM05D004702 ORTHO05D005505 8.3e-141 504.6 479 59.5
Oeu054792.1 Olea europaea HOM05D004702 ORTHO05D005505 4.1e-140 502.3 479 56.6
Hma1.2p1_0360F.1_g135770 Hydrangea macrophylla HOM05D004702 ORTHO05D005505 5.4e-140 501.9 481 57.2
Atru.BG.237.p Acer truncatum HOM05D004702 ORTHO05D005505 2.7e-139 499.6 385 68.6
Lj1g0008884 Lotus japonicus HOM05D004702 ORTHO05D005505 3.5e-139 499.2 477 56.6
Oeu009775.1 Olea europaea HOM05D004702 ORTHO05D005505 7.8e-139 498.0 473 56.7
QL02p004185 Quercus lobata HOM05D004702 ORTHO05D005505 1.3e-138 497.3 471 57.1
arahy.Tifrunner.gnm1.ann1.WJS3XD Arachis hypogaea HOM05D004702 ORTHO05D005505 1.7e-138 496.9 511 54.0
Nitab4.5_0000287g0020 Nicotiana tabacum HOM05D004702 ORTHO05D005505 3.0e-138 496.1 440 60.5
Nitab4.5_0005129g0020 Nicotiana tabacum HOM05D004702 ORTHO05D005505 6.6e-138 495.0 437 60.9
arahy.Tifrunner.gnm1.ann1.L8L5ZS Arachis hypogaea HOM05D004702 ORTHO05D005505 8.6e-138 494.6 509 54.4
DCAR_012789 Daucus carota HOM05D004702 ORTHO05D005505 5.6e-137 491.9 441 58.7
Cfa009956 Carpinus fangiana HOM05D004702 ORTHO05D005505 7.3e-137 491.5 477 56.0
CAN.G1030.31 Capsicum annuum HOM05D004702 ORTHO05D005505 1.6e-136 490.3 492 55.1
Dinv39282 Davidia involucrata HOM05D004702 ORTHO05D005505 3.6e-136 489.2 459 59.5
Medtr3g102120 Medicago truncatula HOM05D004702 ORTHO05D005505 1.2e-134 484.2 483 55.3
TPR.G24175 Trifolium pratense HOM05D004702 ORTHO05D005505 1.5e-134 483.8 500 54.2
PGR083G2110 Punica granatum HOM05D004702 ORTHO05D005505 2.6e-134 483.0 477 56.2
Lj4C62G3 Lonicera japonica HOM05D004702 ORTHO05D005505 7.5e-134 481.5 437 58.1
VMungo0647G1506 Vigna mungo HOM05D004702 ORTHO05D005505 2.9e-133 479.6 477 53.7
Haze_18055 Corylus avellana HOM05D004702 ORTHO05D005505 4.9e-133 478.8 468 56.2
Haze_18053 Corylus avellana HOM05D004702 ORTHO05D005505 5.4e-132 475.3 468 55.8
Psat0s3591g0040 Pisum sativum HOM05D004702 ORTHO05D005505 1.0e-130 471.1 489 53.4
Lsat_1_v5_gn_1_22040 Lactuca sativa HOM05D004702 ORTHO05D005505 1.3e-130 470.7 480 55.4
CsaV3_4G034620 Cucumis sativus L. HOM05D004702 ORTHO05D005505 1.1e-129 467.6 482 56.2
Actinidia01089 Actinidia chinensis HOM05D004702 ORTHO05D005505 7.3e-129 464.9 440 58.2
Aqoxy6G01249 Aquilegia oxysepala HOM05D004702 ORTHO05D005505 1.4e-127 460.7 417 55.4
Ca_15936_v3 Cicer arietinum L. HOM05D004702 ORTHO05D005505 1.4e-127 460.7 488 53.7
MELO3C016778.2 Cucumis melo HOM05D004702 ORTHO05D005505 1.5e-126 457.2 466 55.6
ClCG05G020100 Citrullus lanatus HOM05D004702 ORTHO05D005505 2.0e-126 456.8 452 56.0
PGSC0003DMG400008008 Solanum tuberosum HOM05D004702 ORTHO05D005505 2.0e-126 456.8 448 55.6
vmacro21496 Vaccinium macrocarpon HOM05D004702 ORTHO05D005505 7.1e-124 448.4 469 53.7
Medtr1g019040 Medicago truncatula HOM05D004702 ORTHO05D005505 4.6e-123 445.7 476 50.8
Solyc04g078630.3 Solanum lycopersicum HOM05D004702 ORTHO05D005505 7.8e-123 444.9 445 54.4
TAR625G0654 Trochodendron aralioides HOM05D004702 ORTHO05D005505 1.5e-121 440.7 395 58.0
Nn5g30368 Nelumbo nucifera HOM05D004702 ORTHO05D005505 2.5e-121 439.9 418 56.0
Sopen04g032210 Solanum pennellii HOM05D004702 ORTHO05D005505 2.5e-121 439.9 417 56.4
ECA247G0009 Erigeron canadensis HOM05D004702 ORTHO05D005505 3.3e-121 439.5 489 51.3
SalBow7G0327 Salvia bowleyana HOM05D004702 ORTHO05D005505 7.3e-121 438.3 463 51.2
PSO541G5103 Papaver somniferum HOM05D004702 ORTHO05D005505 2.1e-120 436.8 463 52.5
TPR.G3800 Trifolium pratense HOM05D004702 ORTHO05D005505 6.2e-120 435.3 488 49.4
PSO675G4695 Papaver somniferum HOM05D004702 ORTHO05D005505 3.1e-119 433.0 477 50.3
HanXRQChr10g0286851 Helianthus annuus HOM05D004702 ORTHO05D005505 6.9e-119 431.8 474 51.5
MSTRG.1063 Avicennia marina HOM05D004702 ORTHO05D005505 2.6e-118 429.9 480 51.2
Peaxi162Scf00882g00017 Petunia axillaris HOM05D004702 ORTHO05D005505 3.4e-118 429.5 438 54.1
HanXRQChr09g0267191 Helianthus annuus HOM05D004702 ORTHO05D005505 8.4e-117 424.9 416 57.5
HanXRQChr04g0103941 Helianthus annuus HOM05D004702 ORTHO05D005505 1.6e-115 420.6 483 50.3
DCAR_019426 Daucus carota HOM05D004702 ORTHO05D005505 4.6e-115 419.1 478 49.8
Sc02g0007400 Simmondsia chinensis HOM05D004702 ORTHO05D005505 1.3e-114 417.5 402 55.7
ECA232G1346 Erigeron canadensis HOM05D004702 ORTHO05D005505 3.3e-113 412.9 404 56.9
Glyma.14G085000 Glycine max HOM05D004702 ORTHO05D005505 1.6e-112 410.6 454 48.7
Sed0014061 Sechium edule HOM05D004702 ORTHO05D005505 3.6e-112 409.5 464 52.2
MBI16_g04313_MAGBIO Magnolia biondii HOM05D004702 ORTHO05D005505 4.0e-111 406.0 483 50.5
Phvul.001G024000 Phaseolus vulgaris HOM05D004702 ORTHO05D005505 4.9e-109 399.1 354 58.2
AUR62035465 Chenopodium quinoa HOM05D004702 ORTHO05D005505 2.7e-107 393.3 482 48.1
Lj5g0017670 Lotus japonicus HOM05D004702 ORTHO05D005505 2.7e-107 393.3 477 47.4
Lalb_Chr14g0368541 Lupinus albus HOM05D004702 ORTHO05D005505 1.3e-106 391.0 478 48.7
Ah.05g167300 Amaranthus hybridus HOM05D004702 ORTHO05D005505 2.0e-102 377.1 434 47.9
HanXRQChr16g0509011 Helianthus annuus HOM05D004702 ORTHO05D005505 3.4e-102 376.3 411 53.3
Hund05336 Selenicereus undatus HOM05D004702 ORTHO05D005505 5.8e-102 375.6 409 51.8
Migut.C00543 Erythranthe guttata HOM05D004702 ORTHO05D005505 7.9e-99 365.2 484 44.8
THA.LOC104801428 Tarenaya hassleriana HOM05D004702 ORTHO05D005505 1.8e-98 364.0 505 43.8
EL10As7g23762 Beta vulgaris HOM05D004702 ORTHO05D005505 1.6e-96 357.5 407 50.4
SGA_v2.0_scaffold14G06974 Striga asiatica HOM05D004702 ORTHO05D005505 2.1e-96 357.1 479 44.1
Rhsim06G0053300 Rhododendron simsii HOM05D004702 ORTHO05D005505 3.1e-95 353.2 399 52.4
Aa31LG3G14060 Aethionema arabicum HOM05D004702 ORTHO05D005505 4.0e-95 352.8 502 43.4
Haze_18006 Corylus avellana HOM05D004702 ORTHO05D005505 6.5e-93 345.5 401 51.4
Ah.11g043030 Amaranthus hybridus HOM05D004702 ORTHO05D005505 8.4e-93 345.1 409 49.6
Ca_13276_v3 Cicer arietinum L. HOM05D004702 ORTHO05D005505 2.7e-91 340.1 305 57.4
Thhalv10028638m.g Eutrema salsugineum HOM05D004702 ORTHO05D005505 4.6e-91 339.3 502 42.8
Carub.0006s2627 Capsella rubella HOM05D004702 ORTHO05D005505 6.7e-90 335.5 495 42.2
GSVIVG01009450001 Vitis vinifera HOM05D004702 ORTHO05D005505 1.6e-88 330.9 200 78.0
AL6G41200 Arabidopsis lyrata HOM05D004702 ORTHO05D005505 2.4e-87 327.0 500 41.8
Atru.chr13.733 Acer truncatum HOM05D004702 ORTHO05D005505 4.5e-86 322.8 205 76.1
BcaB01g01331 Brassica carinata HOM05D004702 ORTHO05D005505 2.9e-85 320.1 505 41.4
BraSC37t46123Z Brassica rapa HOM05D004702 ORTHO05D005505 7.9e-83 312.0 504 40.1
SGA_v2.0_scaffold197G41020 Striga asiatica HOM05D004702 ORTHO05D005505 1.3e-82 311.2 473 40.4
A10p08810 Brassica napus HOM05D004702 ORTHO05D005505 3.9e-82 309.7 504 40.1
Lalb_Chr23g0267231 Lupinus albus HOM05D004702 ORTHO05D005505 5.1e-82 309.3 238 61.8
unitig_8.g5031 Utricularia gibba HOM05D004702 ORTHO05D005505 2.8e-80 303.5 401 45.6
CDE01G0679 Ceratophyllum demersum HOM05D004702 ORTHO05D005505 2.0e-78 297.4 463 39.1
C09p38410 Brassica napus HOM05D004702 ORTHO05D005505 7.7e-78 295.4 501 38.5
SalBow6G2833 Salvia bowleyana HOM05D004702 ORTHO05D005505 8.5e-77 292.0 466 42.1
SalBow6G7027 Salvia bowleyana HOM05D004702 ORTHO05D005505 8.5e-77 292.0 466 41.8
Migut.N02734 Erythranthe guttata HOM05D004702 ORTHO05D005505 1.4e-74 284.6 346 46.0
Zm00001eb247120 Zea mays HOM05D004702 ORTHO05D005505 1.1e-73 281.6 441 37.2
HPP92_017369 Vanilla planifolia HOM05D004702 ORTHO05D005505 1.5e-73 281.2 392 43.1
ATR0762G037 Amborella trichopoda HOM05D004702 ORTHO05D005505 8.2e-72 275.4 407 42.0
Lsat_1_v5_gn_4_127260 Lactuca sativa HOM05D004702 ORTHO05D005505 1.4e-68 264.6 194 65.5
SEGI_05734 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 4.7e-67 259.6 430 37.0
SEGI_36308 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 7.4e-65 252.3 411 40.1
SEGI_19446 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 2.2e-61 240.7 412 38.6
AagrBONN_evm.TU.Sc2ySwM_228.394 Anthoceros agrestis HOM05D004702 ORTHO05D005505 7.2e-60 235.7 415 36.1
SEGI_03871 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 3.0e-58 230.3 413 39.7
Psat0s3398g0240 Pisum sativum HOM05D004702 ORTHO05D005505 1.1e-55 221.9 163 63.2
arahy.Tifrunner.gnm1.ann1.7E6QIB Arachis hypogaea HOM05D004702 ORTHO05D005505 1.4e-55 221.5 154 68.2
arahy.Tifrunner.gnm1.ann1.7V26PZ Arachis hypogaea HOM05D004702 ORTHO05D005505 1.4e-55 221.5 154 68.2
HPP92_010365 Vanilla planifolia HOM05D004702 ORTHO05D005505 1.8e-55 221.1 383 37.1
Pp3c15_17100 Physcomitrium patens HOM05D004702 ORTHO05D005505 7.7e-54 215.7 499 34.5
SEGI_12847 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 8.5e-53 212.2 392 37.0
CARHR264230 Cardamine hirsuta HOM05D004702 ORTHO05D005505 8.6e-45 185.7 168 53.6
Sp6g10680 Schrenkiella parvula HOM05D004702 ORTHO05D005505 1.5e-44 184.9 172 53.5
AT4G06536 Arabidopsis thaliana HOM05D004702 ORTHO05D005505 1.9e-44 184.5 169 54.4
SMO145G0126 Selaginella moellendorffii HOM05D004702 ORTHO05D005505 4.7e-43 179.9 437 31.8
Psat0s3398g0080 Pisum sativum HOM05D004702 ORTHO05D005505 5.7e-41 172.9 109 67.9
SMO112G0032 Selaginella moellendorffii HOM05D004702 ORTHO05D005505 1.1e-36 158.7 388 32.0
AUR62044709 Chenopodium quinoa HOM05D004702 ORTHO05D005505 9.5e-36 155.6 312 39.7
AUR62044714 Chenopodium quinoa HOM05D004702 ORTHO05D005505 1.2e-35 155.2 269 42.4
Nn7g37290 Nelumbo nucifera HOM05D004702 ORTHO05D005505 1.6e-35 154.8 151 53.6
Os02g0614700 Oryza sativa ssp. japonica HOM05D004702 ORTHO05D005505 1.4e-34 151.8 161 41.6
AT4G06534 Arabidopsis thaliana HOM05D004702 ORTHO05D005505 9.8e-33 145.6 336 35.4
Sp6g10670 Schrenkiella parvula HOM05D004702 ORTHO05D005505 2.7e-30 137.5 337 33.5
CBR_g733 Chara braunii HOM05D004702 ORTHO05D005505 2.4e-23 114.4 264 33.3
Glyma.15G095100 Glycine max HOM05D004702 ORTHO05D005505 6.2e-19 99.8 98 52.0
SMO364G0277 Selaginella moellendorffii HOM05D051657 ORTHO05D005505 7.8e-14 82.8 119 37.8
SEGI_40713 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 8.9e-10 69.3 110 34.5


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