Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.3e-142 508.8 247 100.0
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 4.4e-77 292.0 260 60.4
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.2e-76 289.7 269 59.1
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 2.9e-76 289.3 261 60.2
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.8e-75 286.6 219 63.5
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 9.2e-75 284.3 274 58.0
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.2e-74 283.9 260 56.2
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 4.6e-74 282.0 216 65.7
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 5.9e-74 281.6 206 67.0
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.9e-73 279.3 294 54.1
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.9e-73 279.3 256 55.9
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 8.6e-73 277.7 245 61.2
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 8.6e-73 277.7 241 60.6
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 4.3e-72 275.4 194 67.5
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 4.3e-72 275.4 248 56.9
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 7.3e-72 274.6 249 57.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.2e-71 273.9 185 69.7
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.2e-71 273.9 207 62.8
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 2.1e-71 273.1 233 57.5
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 8.0e-71 271.2 271 54.2
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.0e-70 270.8 212 61.8
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.0e-70 270.8 217 59.0
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 5.2e-70 268.5 261 54.4
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 6.8e-70 268.1 249 54.6
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 8.9e-70 267.7 252 54.8
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 1.5e-69 266.9 252 55.6
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 2.6e-69 266.2 253 55.3
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 4.4e-69 265.4 195 65.6
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 5.8e-69 265.0 208 63.5
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 2.2e-68 263.1 250 54.8
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 4.9e-68 261.9 196 62.8
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 8.3e-68 261.2 195 63.1
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.1e-67 260.8 238 54.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.4e-67 260.4 201 60.7
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.4e-67 260.4 221 57.5
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 1.9e-67 260.0 197 64.5
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 3.2e-67 259.2 195 62.6
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.1e-67 258.8 267 55.8
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 7.0e-67 258.1 193 61.1
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 9.2e-67 257.7 192 60.9
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 1.2e-66 257.3 190 64.7
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.2e-66 257.3 166 71.1
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 1.2e-66 257.3 202 61.9
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.6e-66 256.9 188 66.0
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 2.0e-66 256.5 194 62.4
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.0e-66 256.5 208 60.1
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.7e-66 256.1 219 57.1
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 3.5e-66 255.8 194 61.3
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 3.5e-66 255.8 194 61.3
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 4.6e-66 255.4 252 53.6
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 4.6e-66 255.4 211 59.2
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.6e-66 255.4 248 56.5
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 4.6e-66 255.4 240 54.6
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 7.8e-66 254.6 254 52.4
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.0e-65 254.2 254 52.0
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.7e-65 253.4 201 61.7
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.3e-65 253.1 286 51.0
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 3.0e-65 252.7 194 61.3
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.0e-65 252.7 235 55.7
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 3.0e-65 252.7 229 56.3
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 3.9e-65 252.3 162 71.6
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 5.0e-65 251.9 219 57.1
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 6.6e-65 251.5 235 55.3
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.6e-65 251.5 199 61.3
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 8.6e-65 251.1 253 51.8
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.5e-64 249.6 219 55.3
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.3e-64 249.2 235 54.9
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 4.3e-64 248.8 177 65.0
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 5.6e-64 248.4 243 51.9
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 5.6e-64 248.4 194 60.8
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 5.6e-64 248.4 169 66.3
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.2e-63 247.3 255 51.0
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.6e-63 246.9 171 66.7
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 3.6e-63 245.7 257 52.1
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 4.7e-63 245.4 207 58.0
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 6.2e-63 245.0 246 52.4
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 8.1e-63 244.6 206 58.7
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.8e-62 243.4 223 53.4
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.3e-62 243.0 207 58.0
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 3.1e-62 242.7 244 52.9
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 5.2e-62 241.9 199 60.8
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 5.2e-62 241.9 166 64.5
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.0e-61 240.0 202 57.4
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.6e-61 239.6 217 55.8
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 3.4e-61 239.2 245 50.6
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.7e-60 236.9 249 49.8
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.9e-60 236.1 175 61.7
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 6.4e-60 235.0 193 57.0
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 6.4e-60 235.0 163 64.4
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 8.3e-60 234.6 198 59.6
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.4e-59 233.8 249 47.8
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.4e-59 233.8 191 59.2
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 9.5e-56 221.1 234 47.9
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 8.1e-55 218.0 186 56.5
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 3.1e-54 216.1 193 57.0
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.7e-52 210.3 298 41.6
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 4.6e-50 202.2 220 49.5
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.8e-47 193.0 119 73.9
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 3.4e-45 186.0 203 44.3
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.7e-44 183.7 225 40.9
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.6e-39 167.2 155 48.4
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 6.9e-38 161.8 133 59.4
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 5.8e-37 158.7 163 44.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 2.4e-35 153.3 185 47.6
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 6.6e-33 145.2 158 43.7
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.0e-25 119.8 135 47.4
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 6.9e-22 108.6 66 72.7
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.5e-21 107.5 174 36.8
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.8e-21 105.5 70 71.4
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 2.9e-20 103.2 226 31.9
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 5.5e-19 99.0 175 32.6
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-16 90.9 76 57.9
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 2.5e-11 73.6 106 40.6
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 3.3e-08 63.2 86 41.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 7.4e-08 62.0 32 81.2
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 7.4e-08 62.0 51 52.9


User provided reference genes

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