Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 3.5e-94 348.6 217 100.0
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 1.1e-23 114.4 190 41.6
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 1.1e-20 104.4 174 46.6
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 1.5e-20 104.0 178 41.6
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 1.9e-20 103.6 186 40.3
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 4.3e-20 102.4 199 38.7
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 5.7e-20 102.1 173 44.5
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 7.4e-20 101.7 192 40.6
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 9.7e-20 101.3 189 40.7
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 9.7e-20 101.3 183 41.5
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 1.3e-19 100.9 177 41.2
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 1.3e-19 100.9 175 46.3
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 1.6e-19 100.5 188 39.9
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 2.8e-19 99.8 200 37.0
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 4.8e-19 99.0 162 48.1
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 1.1e-18 97.8 189 40.2
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 1.1e-18 97.8 185 39.5
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 1.4e-18 97.4 175 42.9
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 4.1e-18 95.9 203 37.4
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 4.1e-18 95.9 183 41.0
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 9.1e-18 94.7 184 39.1
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.5e-17 94.0 170 40.0
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 1.5e-17 94.0 203 43.8
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 2.0e-17 93.6 191 37.7
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 2.6e-17 93.2 155 47.7
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 2.6e-17 93.2 188 45.2
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 3.4e-17 92.8 180 38.3
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 4.5e-17 92.4 188 39.4
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 7.7e-17 91.7 182 39.0
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 1.3e-16 90.9 188 38.8
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.3e-16 90.9 193 39.9
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 1.7e-16 90.5 208 39.9
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 2.2e-16 90.1 194 39.7
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.2e-16 90.1 194 39.7
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 2.2e-16 90.1 194 39.7
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 2.9e-16 89.7 195 35.9
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 3.8e-16 89.4 189 36.0
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 6.5e-16 88.6 185 42.7
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.5e-16 88.2 194 39.7
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 8.5e-16 88.2 182 40.1
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 1.1e-15 87.8 194 43.3
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 1.4e-15 87.4 169 40.8
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 1.4e-15 87.4 208 36.5
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 3.2e-15 86.3 185 42.2
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 4.2e-15 85.9 184 39.1
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 9.4e-15 84.7 184 40.2
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 1.2e-14 84.3 200 34.5
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 2.7e-14 83.2 246 37.0
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 4.6e-14 82.4 181 37.6
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 6.1e-14 82.0 181 34.3
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 6.1e-14 82.0 172 38.4
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 7.9e-14 81.6 182 37.9
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 1.4e-13 80.9 218 36.7
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 1.4e-13 80.9 168 40.5
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 2.3e-13 80.1 183 39.3
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 2.3e-13 80.1 171 38.0
MBI18_g24947_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 2.3e-13 80.1 176 34.1
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 2.3e-13 80.1 193 44.6
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.1e-13 79.0 171 38.0
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 6.7e-13 78.6 174 38.5
MBI19_g29995_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 8.8e-13 78.2 173 38.2
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 8.8e-13 78.2 171 38.6
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 1.5e-12 77.4 182 36.8
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 2.0e-12 77.0 200 41.0
Nitab4.5_0002828g0030 Nicotiana tabacum HOM05D007468 ORTHO05D009051 3.3e-12 76.3 203 39.4
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 7.4e-12 75.1 181 40.9
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 1.7e-11 73.9 185 34.1
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 1.7e-11 73.9 168 35.1
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 1.7e-11 73.9 175 41.1
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 3.7e-11 72.8 179 40.2
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 4.8e-11 72.4 162 37.7
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 8.2e-11 71.6 183 39.3
Dinv10066 Davidia involucrata HOM05D007468 ORTHO05D009051 1.1e-10 71.2 108 54.6
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.4e-10 70.9 217 33.2
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 2.4e-10 70.1 169 37.3
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 2.4e-10 70.1 183 36.6
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 3.1e-10 69.7 220 34.1
Potri.014G123500 Populus trichocarpa HOM05D007468 ORTHO05D009051 3.1e-10 69.7 179 36.3
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 3.1e-10 69.7 181 38.7
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 4.1e-10 69.3 177 32.8
Peaxi162Scf00140g01310 Petunia axillaris HOM05D007468 ORTHO05D009051 5.3e-10 68.9 193 40.9
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 6.9e-10 68.6 169 41.4
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 1.5e-09 67.4 154 39.0
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 3.4e-09 66.2 154 38.3
PSO170G3554 Papaver somniferum HOM05D007468 ORTHO05D009051 3.4e-09 66.2 175 35.4
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 5.9e-09 65.5 136 39.0
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 1.7e-08 63.9 229 29.3
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 2.9e-08 63.2 172 33.1
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 2.9e-08 63.2 219 36.1
ATR0730G063 Amborella trichopoda HOM05D045150 ORTHO05D009051 6.5e-08 62.0 208 32.7
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 6.5e-08 62.0 173 32.4
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 5.5e-07 58.9 172 33.1
Potri.002G199100 Populus trichocarpa HOM05D007468 ORTHO05D009051 5.5e-07 58.9 180 36.7
ATR0706G066 Amborella trichopoda HOM05D045150 ORTHO05D009051 7.2e-07 58.5 200 31.5
Sopen06g035970 Solanum pennellii HOM05D007468 ORTHO05D009051 1.2e-06 57.8 191 33.5
Nn4g25660 Nelumbo nucifera HOM05D007468 ORTHO05D009051 2.1e-06 57.0 76 50.0
Gohir.A12G126800 Gossypium hirsutum HOM05D041120 ORTHO05D009051 4.7e-06 55.8 192 32.3


User provided reference genes

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