Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0622 Cannabis sativa HOM05D003173 ORTHO05D003546 1.8e-96 355.9 175 100.0
CANSAT25G2444 Cannabis sativa HOM05D003173 ORTHO05D003546 2.7e-81 305.4 166 92.8
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 1.3e-19 100.5 230 36.5
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.5e-18 97.1 205 38.0
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 8.1e-17 91.3 207 35.3
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.2e-15 87.4 208 34.6
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 2.0e-15 86.7 249 32.5
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 3.4e-15 85.9 203 37.9
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 1.3e-14 84.0 206 30.6
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 5.4e-13 78.6 182 34.1
Ciclev10027470m.g Citrus clementina HOM05D003173 ORTHO05D003546 7.1e-13 78.2 197 34.5
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 9.2e-13 77.8 199 32.7
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 9.2e-13 77.8 239 28.0
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.2e-12 77.4 231 30.3
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 1.6e-12 77.0 180 32.2
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.6e-12 77.0 239 30.1
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.6e-12 77.0 256 27.7
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.1e-12 76.6 240 28.8
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.1e-12 76.6 234 30.3
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.5e-12 75.9 245 30.2
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 4.6e-12 75.5 221 29.9
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 4.6e-12 75.5 215 32.1
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.6e-12 75.5 187 33.2
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 6.0e-12 75.1 160 39.4
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.0e-11 74.3 241 29.5
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.0e-11 74.3 241 27.4
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.3e-11 73.9 252 27.0
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 2.3e-11 73.2 212 30.7
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 3.0e-11 72.8 239 29.7
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 3.9e-11 72.4 169 32.5
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 3.9e-11 72.4 234 28.6
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 5.1e-11 72.0 139 39.6
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 6.6e-11 71.6 241 29.0
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 6.6e-11 71.6 243 27.6
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.1e-10 70.9 242 30.2
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 1.5e-10 70.5 195 27.7
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.5e-10 70.5 179 31.8
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 1.9e-10 70.1 254 26.4
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 1.9e-10 70.1 233 33.0
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 1.9e-10 70.1 257 27.2
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 2.5e-10 69.7 246 30.1
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 2.5e-10 69.7 150 36.7
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 3.3e-10 69.3 228 27.2
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 4.3e-10 68.9 186 30.6
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 5.6e-10 68.6 223 27.8
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 5.6e-10 68.6 233 27.0
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 7.3e-10 68.2 256 27.3
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 7.3e-10 68.2 170 30.0
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 7.3e-10 68.2 158 39.9
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 7.3e-10 68.2 230 27.0
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 9.6e-10 67.8 189 31.2
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.2e-09 67.4 184 31.5
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 1.6e-09 67.0 255 29.0
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.6e-09 67.0 236 27.5
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.6e-09 67.0 222 32.0
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 2.1e-09 66.6 255 27.1
FAN19G2722 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.1e-09 66.6 171 35.7
FAN28G2348 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.1e-09 66.6 170 35.3
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.1e-09 66.6 175 29.1
Medtr5g023030 Medicago truncatula HOM05D003173 ORTHO05D003546 2.1e-09 66.6 127 37.8
Glyma.11G081300 Glycine max HOM05D003173 ORTHO05D003546 2.8e-09 66.2 127 40.9
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 3.6e-09 65.9 247 28.3
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 3.6e-09 65.9 256 28.9
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 3.6e-09 65.9 255 29.0
Ca_24945_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 3.6e-09 65.9 153 37.9
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 3.6e-09 65.9 218 32.6
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 3.6e-09 65.9 242 29.8
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 4.7e-09 65.5 224 30.4
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 4.7e-09 65.5 225 30.2
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.2e-09 65.1 239 27.2
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 6.2e-09 65.1 171 33.3
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 8.1e-09 64.7 185 32.4
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.1e-08 64.3 254 26.8
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 1.4e-08 63.9 241 26.6
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.4e-08 63.9 239 26.4
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.4e-08 63.9 239 26.4
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 1.4e-08 63.9 247 30.0
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.4e-08 63.9 194 29.9
VMungo1215G2410 Vigna mungo HOM05D003173 ORTHO05D003546 1.4e-08 63.9 142 38.0
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 1.8e-08 63.5 185 29.2
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 1.8e-08 63.5 223 30.5
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.4e-08 63.2 254 27.2
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.4e-08 63.2 254 26.4
Phvul.002G104300 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 2.4e-08 63.2 137 37.2
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 2.4e-08 63.2 213 30.0
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 3.1e-08 62.8 183 30.1
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 3.1e-08 62.8 196 27.6
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 4.0e-08 62.4 195 29.2
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 5.2e-08 62.0 178 25.8
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 5.2e-08 62.0 179 30.2
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 5.2e-08 62.0 257 28.8
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 5.2e-08 62.0 221 29.4
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 6.8e-08 61.6 261 24.5
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 8.9e-08 61.2 172 35.5
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 8.9e-08 61.2 228 32.0
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 1.2e-07 60.8 261 28.7
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 1.2e-07 60.8 257 30.0
Glyma.02G043800 Glycine max HOM05D003173 ORTHO05D003546 1.2e-07 60.8 149 34.2
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.5e-07 60.5 235 26.4
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 2.0e-07 60.1 196 28.6
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.0e-07 60.1 218 27.5
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 2.0e-07 60.1 228 27.6
Lalb_Chr05g0229691 Lupinus albus HOM05D003173 ORTHO05D003546 2.6e-07 59.7 170 32.9
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 3.4e-07 59.3 254 28.7
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 3.4e-07 59.3 179 29.1
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 4.4e-07 58.9 160 35.0
Haze_03701 Corylus avellana HOM05D003173 ORTHO05D003546 4.4e-07 58.9 87 47.1
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 4.4e-07 58.9 240 26.7
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 4.4e-07 58.9 148 35.8
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 4.4e-07 58.9 194 27.3
Manes.02G110500 Manihot esculenta HOM05D003173 ORTHO05D003546 5.8e-07 58.5 165 32.7
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 5.8e-07 58.5 253 26.1
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 5.8e-07 58.5 209 28.7
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 7.6e-07 58.2 182 30.2
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 9.9e-07 57.8 154 33.1
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 1.3e-06 57.4 266 29.3
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 1.3e-06 57.4 252 28.2
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 1.7e-06 57.0 183 30.1
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.2e-06 56.6 224 27.2
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 2.9e-06 56.2 227 26.4
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 2.9e-06 56.2 239 25.9
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 2.9e-06 56.2 190 30.0
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 3.8e-06 55.8 179 26.3
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 3.8e-06 55.8 257 30.0
Lj2g0017226 Lotus japonicus HOM05D003173 ORTHO05D003546 4.9e-06 55.5 169 32.0
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 4.9e-06 55.5 151 33.8
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 6.4e-06 55.1 148 30.4
C06p50010 Brassica napus HOM05D003173 ORTHO05D003546 8.4e-06 54.7 176 30.1
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 8.4e-06 54.7 248 29.4
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 8.4e-06 54.7 207 26.6
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 8.4e-06 54.7 194 28.9


User provided reference genes

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