Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 7.2e-184 647.1 330 100.0
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 6.9e-78 295.0 333 54.7
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 4.2e-75 285.8 334 52.7
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.5e-69 267.3 345 51.6
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 2.6e-69 266.5 336 51.5
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.0e-68 264.6 334 51.8
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 1.3e-68 264.2 337 51.6
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.1e-67 261.2 337 50.4
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.9e-67 260.4 328 51.2
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 7.2e-67 258.5 340 51.2
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.4e-65 254.2 330 51.8
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.4e-65 254.2 330 51.8
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.8e-65 253.8 340 49.1
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 3.0e-65 253.1 344 50.0
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 5.2e-65 252.3 339 50.1
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 6.7e-65 251.9 331 51.4
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 3.3e-64 249.6 344 49.7
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 5.7e-64 248.8 337 49.3
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 9.7e-64 248.1 344 49.4
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.8e-63 246.5 328 50.6
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 6.3e-63 245.4 340 50.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 8.2e-63 245.0 336 47.6
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 8.2e-63 245.0 338 47.9
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 2.6e-61 240.0 341 49.9
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.0e-60 238.0 348 47.7
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.2e-60 236.9 338 46.2
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 3.8e-60 236.1 337 49.6
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 5.0e-60 235.7 335 49.3
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 8.5e-60 235.0 339 49.0
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 2.5e-59 233.4 312 47.8
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 3.2e-59 233.0 337 47.8
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 1.2e-58 231.1 312 49.7
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 8.8e-57 224.9 331 49.2
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 4.4e-56 222.6 341 46.3
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.2e-55 220.3 337 47.8
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.8e-55 219.9 327 47.4
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 3.7e-55 219.5 354 44.4
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 8.3e-55 218.4 345 43.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 6.5e-52 208.8 352 44.9
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.9e-51 207.2 347 42.4
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 2.1e-50 203.8 346 42.8
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.7e-50 202.6 315 44.8
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 4.0e-49 199.5 342 43.6
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 8.8e-49 198.4 342 43.3
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.5e-48 197.6 345 40.0
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 2.6e-48 196.8 343 41.4
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 4.4e-48 196.1 311 46.0
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.7e-47 194.1 337 41.8
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 8.3e-47 191.8 395 40.0
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 2.3e-44 183.7 373 37.0
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 2.5e-43 180.3 251 47.4
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 9.5e-43 178.3 316 40.8
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 6.1e-42 175.6 375 38.4
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 6.8e-41 172.2 334 38.0
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 2.0e-40 170.6 398 38.2
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.7e-39 167.5 323 39.0
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 6.3e-39 165.6 329 40.7
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 3.2e-38 163.3 334 40.1
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 5.4e-38 162.5 339 39.8
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.3e-36 157.9 344 36.9
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 5.0e-36 156.0 273 42.5
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 8.6e-36 155.2 350 38.9
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.1e-35 154.8 329 39.8
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 1.9e-35 154.1 334 39.5
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 4.3e-35 152.9 332 41.9
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 4.3e-35 152.9 290 39.7
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 7.3e-35 152.1 338 39.9
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 9.5e-35 151.8 335 38.8
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.4e-33 147.9 332 38.9
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.4e-33 147.9 352 38.9
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 4.0e-33 146.4 332 38.6
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 5.8e-32 142.5 334 37.4
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 9.8e-32 141.7 343 34.4
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 2.2e-31 140.6 335 36.4
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 2.2e-31 140.6 317 37.2
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 3.7e-31 139.8 334 36.2
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.7e-31 139.8 331 37.5
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 6.4e-31 139.0 336 38.4
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 2.4e-30 137.1 327 36.4
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 3.2e-30 136.7 328 37.8
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 5.4e-30 136.0 352 36.1
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 7.0e-30 135.6 330 39.7
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.6e-29 134.4 334 36.8
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 4.6e-29 132.9 312 35.3
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 4.6e-29 132.9 336 38.1
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.1e-27 128.3 332 36.4
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.1e-27 128.3 333 37.2
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 3.3e-27 126.7 329 38.6
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 5.6e-27 125.9 328 36.3
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 6.2e-26 122.5 222 40.5
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 1.4e-25 121.3 251 40.2
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 1.8e-25 120.9 332 34.9
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 3.1e-25 120.2 245 35.5
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 6.8e-25 119.0 329 36.8
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 1.5e-24 117.9 322 34.5
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.0e-24 117.5 348 34.8
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 9.8e-24 115.2 264 38.3
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 1.7e-23 114.4 328 35.1
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 3.7e-23 113.2 330 32.7
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 3.2e-22 110.2 174 45.4
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 7.1e-22 109.0 352 34.4
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.6e-21 107.8 214 39.7
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.7e-21 107.1 199 41.7
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.5e-21 106.7 325 35.7
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.1e-20 102.8 154 46.8
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 5.6e-19 99.4 294 34.0
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.6e-18 97.8 229 37.6
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 2.8e-18 97.1 341 33.7
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 2.3e-17 94.0 198 38.9
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 4.0e-17 93.2 290 32.1
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 8.9e-17 92.0 320 33.4
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 3.4e-16 90.1 148 42.6
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 1.1e-14 85.1 198 35.9
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 1.2e-13 81.6 253 32.0
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 2.7e-13 80.5 247 34.0
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 6.0e-13 79.3 329 28.9
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 2.5e-11 73.9 119 44.5
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.6e-10 71.2 242 31.8
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 6.2e-10 69.3 104 46.2
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 6.8e-09 65.9 321 30.2
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 1.2e-08 65.1 232 29.3
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 3.4e-08 63.5 65 58.5
Actinidia27988 Actinidia chinensis HOM05D006273 ORTHO05D007607 4.9e-07 59.7 49 69.4
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 7.1e-06 55.8 54 55.6


User provided reference genes

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