Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 8.4e-88 327.4 219 100.0
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 3.6e-54 215.7 221 68.8
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.8e-53 213.4 224 68.8
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 2.3e-53 213.0 221 69.7
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 2.3e-53 213.0 221 67.9
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 5.1e-53 211.8 220 69.1
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 6.7e-53 211.5 218 68.3
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 1.5e-52 210.3 226 65.9
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 3.3e-52 209.1 225 66.2
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 4.3e-52 208.8 218 65.1
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 7.4e-52 208.0 221 67.9
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 9.7e-52 207.6 221 66.5
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 2.2e-51 206.5 225 65.8
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 8.2e-51 204.5 222 66.7
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 3.1e-50 202.6 222 66.2
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 3.1e-50 202.6 220 66.4
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 1.2e-49 200.7 220 65.5
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 2.0e-49 199.9 225 65.3
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 3.8e-48 195.7 221 66.5
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.8e-48 195.7 223 64.1
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 3.8e-48 195.7 223 64.1
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 3.8e-48 195.7 223 64.1
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 3.8e-48 195.7 220 65.0
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 6.5e-48 194.9 223 65.0
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 8.5e-48 194.5 224 63.8
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.9e-47 193.4 220 64.5
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 1.9e-47 193.4 222 64.9
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.9e-47 193.4 222 63.1
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 2.5e-47 193.0 220 64.5
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 2.5e-47 193.0 219 65.3
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 3.2e-47 192.6 221 65.6
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.6e-46 190.3 217 61.8
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 2.1e-46 189.9 225 62.2
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 3.6e-46 189.1 222 63.1
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 7.9e-46 188.0 219 62.1
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 7.9e-46 188.0 218 63.3
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 1.4e-45 187.2 222 61.3
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 1.8e-45 186.8 224 63.8
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 1.8e-45 186.8 224 62.9
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 3.0e-45 186.0 224 60.7
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 3.0e-45 186.0 221 63.8
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 3.9e-45 185.7 221 62.0
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 3.9e-45 185.7 226 61.9
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 5.1e-45 185.3 155 80.6
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 5.1e-45 185.3 220 62.7
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.1e-44 184.1 156 78.8
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.5e-44 183.7 221 62.0
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 9.7e-44 181.0 224 61.2
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.3e-43 180.6 156 76.9
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 1.7e-43 180.3 220 61.8
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 2.8e-43 179.5 219 61.2
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.8e-43 179.5 232 59.5
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 4.8e-43 178.7 220 61.4
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 4.8e-43 178.7 222 62.6
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 6.3e-43 178.3 145 70.3
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 8.2e-43 177.9 220 53.6
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 8.2e-43 177.9 226 58.8
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.1e-42 177.6 222 58.6
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 1.1e-42 177.6 219 60.7
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 1.8e-42 176.8 221 62.9
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 3.1e-42 176.0 222 61.7
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 3.1e-42 176.0 220 60.9
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 5.3e-42 175.3 223 61.9
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 6.9e-42 174.9 219 60.7
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 6.9e-42 174.9 223 60.1
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 1.2e-41 174.1 226 61.5
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.5e-41 173.7 175 62.3
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 4.5e-41 172.2 230 61.7
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 7.7e-41 171.4 219 60.7
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 2.2e-40 169.9 218 60.1
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 5.0e-40 168.7 219 59.8
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 2.5e-39 166.4 223 60.5
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 9.4e-39 164.5 221 59.7
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 9.4e-39 164.5 219 62.1
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.2e-38 164.1 217 59.0
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 1.2e-38 164.1 218 58.7
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 3.6e-38 162.5 222 57.2
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 3.0e-37 159.5 178 64.6
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 1.1e-36 157.5 216 57.4
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 1.1e-36 157.5 128 79.7
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 2.6e-36 156.4 209 59.8
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 3.3e-36 156.0 167 59.3
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 1.3e-35 154.1 152 71.7
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 4.8e-35 152.1 172 59.9
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 1.1e-34 151.0 225 56.0
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 1.7e-32 143.7 220 53.6
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 7.2e-31 138.3 156 65.4
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 4.0e-29 132.5 107 85.0
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 5.2e-29 132.1 126 74.6
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 7.5e-28 128.3 156 62.2
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 2.8e-27 126.3 155 59.4
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 8.2e-27 124.8 157 61.1
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 1.2e-25 120.9 149 61.7
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 5.9e-25 118.6 107 79.4
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 3.8e-24 115.9 213 50.7
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 1.9e-23 113.6 186 48.9
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 7.2e-23 111.7 76 78.9
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 9.4e-23 111.3 106 76.4
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 1.6e-22 110.5 195 35.4
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 1.4e-21 107.5 85 65.9
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 2.0e-20 103.6 106 75.5
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 6.3e-19 98.6 128 50.0
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.4e-18 97.4 96 57.3
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.4e-18 96.7 96 57.3
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 4.1e-18 95.9 135 44.4
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 3.5e-17 92.8 147 44.9
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 4.7e-14 82.4 81 60.5
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 6.1e-14 82.0 141 45.4
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 3.0e-13 79.7 80 53.8
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 1.2e-12 77.8 60 65.0
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 2.4e-10 70.1 76 53.9
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.0e-08 64.7 102 47.1
ATR0829G181 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.9e-08 63.2 139 37.4
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 2.1e-06 57.0 59 59.3
ATR0071G034 Amborella trichopoda HOM05D007100 ORTHO05D008958 3.6e-06 56.2 99 44.4
AUR62044181 Chenopodium quinoa HOM05D026575 ORTHO05D028765 6.1e-06 55.5 59 57.6


User provided reference genes

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