Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 3.6e-174 614.8 299 100.0
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 3.2e-74 282.7 298 52.7
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 1.1e-61 241.1 283 48.4
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 1.4e-61 240.7 274 47.8
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 1.0e-59 234.6 292 45.9
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 1.7e-59 233.8 289 48.1
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 8.5e-59 231.5 291 46.0
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 1.6e-52 210.7 312 42.0
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 1.5e-50 204.1 269 43.1
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 2.8e-49 199.9 281 43.8
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 3.6e-49 199.5 281 43.4
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 3.0e-48 196.4 346 39.6
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 5.2e-48 195.7 230 49.1
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 6.8e-48 195.3 288 42.4
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 9.8e-47 191.4 302 40.4
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 6.3e-46 188.7 304 38.8
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 2.4e-45 186.8 285 42.1
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 2.0e-44 183.7 298 39.6
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 2.7e-44 183.3 286 38.5
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 3.3e-42 176.4 293 39.2
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 2.1e-41 173.7 283 39.2
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 3.6e-41 172.9 281 41.6
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 6.1e-41 172.2 282 41.8
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 1.0e-40 171.4 267 40.8
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 1.4e-40 171.0 265 43.0
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 1.8e-40 170.6 279 40.1
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 6.8e-40 168.7 283 39.2
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 5.8e-39 165.6 256 42.2
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 7.5e-39 165.2 292 38.0
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 2.9e-38 163.3 313 35.5
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.2e-36 157.9 233 41.6
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 3.3e-34 149.8 279 34.4
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 1.2e-33 147.9 258 39.9
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 2.0e-31 140.6 256 37.5
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 7.0e-29 132.1 205 43.4
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 1.1e-24 118.2 164 48.2
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 1.4e-24 117.9 268 31.7
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 4.0e-24 116.3 150 42.0
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 6.4e-22 109.0 258 33.3
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 2.1e-20 104.0 107 51.4
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 7.8e-20 102.1 285 31.6
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 6.8e-16 89.0 86 48.8
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 3.2e-13 80.1 247 29.1
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 1.2e-12 78.2 262 28.6
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 7.8e-12 75.5 249 26.9
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 3.0e-11 73.6 249 28.9
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 3.0e-11 73.6 109 37.6
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 2.1e-09 67.4 58 62.1
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 1.1e-08 65.1 226 27.9
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 2.4e-08 63.9 286 22.0
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 6.9e-08 62.4 271 24.7
AagrBONN_evm.TU.Sc2ySwM_368.552 Anthoceros agrestis HOM05D020309 ORTHO05D010377 1.2e-07 61.6 243 24.3


User provided reference genes

Program Settings