Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 2.9e-126 455.3 237 100.0
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 3.6e-76 288.9 224 67.0
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 1.7e-73 280.0 224 65.2
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.1e-72 277.3 224 67.0
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 1.6e-71 273.5 228 66.2
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 4.5e-71 271.9 222 66.7
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 4.5e-71 271.9 222 63.1
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 7.7e-71 271.2 220 65.9
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 1.0e-70 270.8 222 66.2
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 2.9e-70 269.2 224 67.0
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 5.0e-70 268.5 220 67.3
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.1e-69 267.3 225 64.9
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.9e-69 266.5 225 64.0
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 4.2e-69 265.4 204 68.6
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 5.5e-69 265.0 222 64.0
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 7.2e-69 264.6 194 70.6
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 7.2e-69 264.6 217 67.3
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 7.2e-69 264.6 222 63.1
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.6e-68 263.5 229 62.9
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 2.7e-68 262.7 234 62.4
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 3.6e-68 262.3 192 68.8
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 6.1e-68 261.5 209 66.0
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.8e-67 260.0 213 63.4
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.0e-67 259.2 198 66.2
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 5.2e-67 258.5 229 62.9
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 5.2e-67 258.5 227 63.9
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 6.8e-67 258.1 224 66.1
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 6.8e-67 258.1 202 67.8
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 5.7e-66 255.0 207 66.2
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 9.7e-66 254.2 200 66.5
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 9.7e-66 254.2 193 67.9
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 9.7e-66 254.2 192 67.7
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.7e-65 253.4 192 67.7
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 4.8e-65 251.9 196 71.4
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 4.8e-65 251.9 228 61.0
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 8.3e-65 251.1 193 68.4
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 9.1e-64 247.7 222 62.6
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 9.1e-64 247.7 224 59.8
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 9.1e-64 247.7 194 66.5
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 1.2e-63 247.3 215 60.9
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 1.2e-63 247.3 216 64.4
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 5.9e-63 245.0 192 67.7
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 5.9e-63 245.0 193 67.9
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 5.9e-63 245.0 200 65.0
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 7.7e-63 244.6 223 61.9
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 7.7e-63 244.6 197 67.0
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 7.7e-63 244.6 241 57.7
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.0e-62 244.2 197 62.9
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 3.8e-62 242.3 198 64.1
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 3.8e-62 242.3 234 58.1
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 6.5e-62 241.5 231 58.4
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 8.5e-62 241.1 222 59.5
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.1e-61 240.7 192 65.6
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.1e-61 240.7 192 65.6
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 1.1e-61 240.7 194 68.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.5e-61 240.4 206 66.0
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 2.5e-61 239.6 233 57.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.2e-61 239.2 193 66.8
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 4.2e-61 238.8 224 60.7
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 9.4e-61 237.7 193 66.8
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 9.4e-61 237.7 192 65.6
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 9.4e-61 237.7 240 57.5
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 9.4e-61 237.7 195 62.6
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 8.0e-60 234.6 195 64.1
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.0e-59 234.2 202 59.9
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 4.0e-59 232.3 161 72.7
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.5e-58 230.3 193 62.2
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 2.0e-58 229.9 230 55.2
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 4.4e-58 228.8 193 61.7
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 9.8e-58 227.6 221 57.0
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.3e-57 227.3 221 57.5
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 1.3e-57 227.3 207 59.4
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 2.8e-57 226.1 202 60.4
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 3.7e-57 225.7 189 62.4
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 8.3e-57 224.6 197 60.9
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.1e-56 224.2 202 63.9
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 2.4e-56 223.0 283 50.5
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 2.0e-55 219.9 163 65.0
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.0e-54 217.6 221 54.8
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.7e-49 200.3 193 58.5
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 4.1e-48 195.7 173 60.7
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 7.0e-48 194.9 222 50.5
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 5.9e-47 191.8 204 55.4
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.7e-46 190.3 222 50.0
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 2.3e-46 189.9 157 65.6
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 1.9e-45 186.8 201 53.7
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.5e-45 186.4 189 62.4
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.5e-45 186.4 179 57.0
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.3e-45 186.0 179 57.0
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 4.7e-44 182.2 225 48.4
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 2.0e-39 166.8 197 47.2
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 2.3e-38 163.3 121 65.3
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.8e-36 156.4 196 49.5
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 5.2e-35 152.1 170 46.5
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 3.7e-33 146.0 169 47.9
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 1.2e-31 141.0 94 74.5
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 3.5e-31 139.4 169 46.2
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.0e-30 137.9 134 56.7
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.5e-29 133.3 89 74.2
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 6.4e-25 118.6 89 67.4
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 3.0e-22 109.8 97 58.8
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 6.2e-20 102.1 110 55.5
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 6.2e-20 102.1 150 46.0
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 2.0e-18 97.1 177 36.2
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.4e-11 74.3 53 64.2
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 2.7e-07 60.1 42 66.7


User provided reference genes

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