Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 2.1e-80 302.4 156 100.0
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 9.3e-65 250.4 156 84.6
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 4.6e-64 248.1 156 82.7
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 4.6e-64 248.1 156 82.7
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 6.0e-64 247.7 156 81.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 1.0e-63 246.9 156 80.8
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.7e-63 246.1 156 82.1
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.7e-63 246.1 156 82.1
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.3e-63 245.7 156 82.7
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 6.6e-63 244.2 156 83.3
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.5e-62 243.0 156 81.4
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 2.5e-62 242.3 156 82.1
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 9.6e-62 240.4 154 81.2
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.3e-61 240.0 152 81.6
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 1.1e-60 236.9 152 81.6
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 2.4e-60 235.7 156 79.5
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 2.6e-59 232.3 156 77.6
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 2.6e-59 232.3 159 78.0
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 3.4e-59 231.9 155 76.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 4.5e-59 231.5 158 79.7
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 5.8e-59 231.1 156 77.6
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 5.8e-59 231.1 158 77.8
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.3e-58 229.9 156 75.6
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.3e-58 229.9 156 75.6
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.7e-58 229.6 156 75.6
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.2e-58 229.2 142 83.1
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.9e-58 228.8 156 75.0
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.4e-58 227.6 156 80.8
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 8.4e-58 227.3 156 78.8
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 8.4e-58 227.3 142 82.4
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.1e-57 226.9 130 86.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 1.1e-57 226.9 156 75.6
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.4e-57 226.5 156 75.0
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.9e-57 226.1 156 77.6
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.9e-57 226.1 150 78.7
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 3.2e-57 225.3 156 75.6
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 4.2e-57 224.9 156 78.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.2e-57 224.9 157 75.8
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 4.2e-57 224.9 160 75.6
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.4e-57 224.6 156 74.4
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 7.1e-57 224.2 157 75.2
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 7.1e-57 224.2 157 79.0
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 7.1e-57 224.2 156 73.7
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 7.1e-57 224.2 157 75.8
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 76.3
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 78.8
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.6e-56 223.0 157 73.2
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 75.0
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.7e-56 222.2 156 78.8
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.5e-56 221.9 157 72.6
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 4.6e-56 221.5 157 75.8
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 73.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 6.0e-56 221.1 130 84.6
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 76.9
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.0e-55 220.3 156 76.3
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.3e-55 219.9 157 72.0
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.8e-55 219.5 144 77.8
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 75.6
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 74.4
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 6.7e-55 217.6 157 72.0
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 6.7e-55 217.6 164 73.8
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 1.5e-54 216.5 124 87.1
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.9e-54 216.1 154 76.0
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 2.5e-54 215.7 156 71.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 9.6e-54 213.8 148 76.4
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.3e-53 213.4 158 74.7
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 2.8e-53 212.2 144 75.7
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 4.8e-53 211.5 158 74.1
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 8.1e-53 210.7 158 69.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 8.1e-53 210.7 158 70.9
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.1e-52 210.3 159 72.3
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 4.0e-52 208.4 162 70.4
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 9.0e-52 207.2 114 93.9
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-51 206.8 158 71.5
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 2.6e-51 205.7 162 72.8
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 2.6e-51 205.7 150 71.3
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 5.8e-51 204.5 117 86.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 7.6e-51 204.1 164 69.5
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 9.9e-51 203.8 166 70.5
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 9.9e-51 203.8 163 68.7
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.7e-50 203.0 158 70.9
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.7e-50 203.0 161 70.2
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.7e-50 203.0 161 70.2
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.2e-50 202.6 163 68.1
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 2.2e-50 202.6 157 68.8
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 159 69.2
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 2.9e-50 202.2 159 70.4
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.4e-49 199.9 116 83.6
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.7e-48 195.7 154 68.2
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 6.0e-48 194.5 127 79.5
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 7.9e-48 194.1 130 78.5
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 4.5e-43 178.3 127 74.8
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 3.8e-42 175.3 116 75.0
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 6.5e-42 174.5 136 70.6
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.1e-41 173.7 128 72.7
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.2e-40 170.2 114 78.1
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.7e-40 169.1 149 63.8
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 4.6e-40 168.3 129 68.2
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 4.6e-40 168.3 156 60.9
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.3e-39 166.8 127 69.3
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 6.7e-39 164.5 138 65.2
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 8.7e-39 164.1 129 69.0
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 4.3e-38 161.8 140 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 5.7e-38 161.4 118 70.3
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 7.4e-38 161.0 101 82.2
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.8e-36 156.4 104 74.0
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 9.0e-36 154.1 141 59.6
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 4.6e-32 141.7 87 77.0
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 2.3e-15 86.3 64 71.9
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.1e-12 77.4 89 48.3
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.2e-11 73.9 122 38.5
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 7.5e-06 54.7 107 35.5


User provided reference genes

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