Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 2.6e-121 438.7 223 100.0
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 8.0e-78 294.3 212 73.6
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 3.4e-76 288.9 196 74.0
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 4.9e-75 285.0 215 71.2
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 3.1e-74 282.3 203 74.9
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 3.1e-74 282.3 215 71.6
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.1e-74 282.3 221 67.9
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 3.1e-74 282.3 213 72.8
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 3.1e-74 282.3 207 74.9
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.6e-73 280.0 206 72.3
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 1.6e-73 280.0 206 72.3
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.0e-73 279.6 212 68.9
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.0e-73 279.6 206 72.8
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 2.7e-73 279.3 207 73.9
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 3.5e-73 278.9 163 83.4
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 3.5e-73 278.9 215 72.1
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 4.5e-73 278.5 214 69.2
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 7.7e-73 277.7 218 68.3
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 7.7e-73 277.7 220 68.2
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 1.7e-72 276.6 220 67.7
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.3e-72 276.2 215 68.8
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 2.3e-72 276.2 219 68.0
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 3.8e-72 275.4 220 67.7
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 6.6e-72 274.6 208 72.1
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 8.6e-72 274.2 220 67.3
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.1e-71 273.9 211 70.1
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 1.1e-71 273.9 213 70.0
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 1.5e-71 273.5 210 69.0
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.5e-71 272.7 220 67.3
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 7.3e-71 271.2 207 69.1
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 4.7e-70 268.5 215 69.8
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.4e-69 266.9 211 69.2
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 1.4e-69 266.9 208 67.3
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 2.3e-69 266.2 215 67.4
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 4.0e-69 265.4 212 67.5
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 5.2e-69 265.0 218 66.1
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.4e-68 262.3 218 66.5
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 3.4e-68 262.3 216 66.2
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 4.4e-68 261.9 186 71.0
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 7.5e-68 261.2 217 67.3
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 9.8e-68 260.8 218 67.0
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 2.2e-67 259.6 213 64.3
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 3.7e-67 258.8 214 66.8
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 4.9e-67 258.5 211 67.3
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 1.1e-66 257.3 224 62.9
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 1.1e-66 257.3 224 62.9
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.1e-66 257.3 206 68.4
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 3.2e-66 255.8 166 75.3
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 4.1e-66 255.4 215 65.6
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 5.4e-66 255.0 146 81.5
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 5.4e-66 255.0 204 67.6
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 5.4e-66 255.0 210 64.3
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 7.0e-66 254.6 205 64.4
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 7.0e-66 254.6 178 70.8
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 7.0e-66 254.6 212 63.7
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 9.2e-66 254.2 206 64.6
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 9.2e-66 254.2 185 69.2
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.2e-65 253.8 218 62.4
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.6e-65 253.4 178 70.2
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.6e-65 253.4 214 63.1
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 2.0e-65 253.1 178 70.2
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.0e-65 253.1 178 70.2
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 2.0e-65 253.1 178 70.2
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 2.0e-65 253.1 179 72.1
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 2.7e-65 252.7 174 72.4
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 2.7e-65 252.7 177 72.9
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 3.5e-65 252.3 213 62.9
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 5.9e-65 251.5 215 61.4
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 7.8e-65 251.1 186 68.3
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.0e-64 250.8 177 71.2
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.0e-64 250.8 186 68.3
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.3e-64 250.4 177 71.2
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.7e-64 250.0 209 65.1
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 2.3e-64 249.6 204 65.2
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.3e-64 249.6 205 65.4
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 5.0e-64 248.4 206 63.6
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 6.6e-64 248.1 187 67.9
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 6.6e-64 248.1 201 65.7
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 1.1e-63 247.3 210 62.9
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.5e-63 246.9 199 64.8
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.9e-63 246.5 227 59.9
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 4.3e-63 245.4 177 70.1
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 5.6e-63 245.0 197 67.0
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 9.5e-63 244.2 207 63.8
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 1.6e-62 243.4 216 63.0
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 2.1e-62 243.0 203 65.5
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 2.8e-62 242.7 129 88.4
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 3.6e-62 242.3 199 63.3
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.7e-62 241.9 145 79.3
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 6.8e-61 238.0 205 62.9
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.5e-60 236.9 134 82.1
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.4e-58 228.4 215 60.9
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 6.6e-56 221.5 148 71.6
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 1.2e-54 217.2 181 61.3
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 1.8e-53 213.4 141 71.6
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 8.9e-53 211.1 215 56.7
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 3.4e-52 209.1 187 65.2
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.5e-44 183.7 156 62.2
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 2.1e-41 173.3 90 87.8
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 3.5e-41 172.6 153 57.5
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 4.6e-41 172.2 126 65.1
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.7e-40 170.2 126 62.7
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 1.7e-40 170.2 154 63.0
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 2.4e-37 159.8 112 67.0
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.0e-36 156.8 146 55.5
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.8e-35 152.5 132 61.4
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.9e-34 150.2 169 53.3
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.8e-29 133.7 113 61.1
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 4.9e-27 125.6 176 43.8
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 2.4e-21 106.7 70 70.0
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 1.6e-14 84.0 126 42.9


User provided reference genes

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