Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 9.6e-77 290.0 142 100.0
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 3.3e-69 265.0 142 90.8
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 3.7e-68 261.5 142 90.1
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 4.6e-63 244.6 142 85.9
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 2.7e-47 192.2 130 75.4
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 5.1e-46 188.0 137 67.9
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 3.8e-41 171.8 131 65.6
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.0e-41 171.4 130 65.4
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.0e-41 171.4 130 65.4
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.4e-40 169.9 130 64.6
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-40 169.1 129 64.3
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.4e-40 167.2 130 64.6
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 4.7e-39 164.9 133 61.7
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-39 164.5 132 62.1
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-38 163.7 132 62.9
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 5.2e-38 161.4 132 62.1
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 8.8e-38 160.6 132 60.6
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-37 160.2 137 61.3
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-37 160.2 132 58.3
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-37 159.5 135 59.3
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-37 159.5 132 60.6
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-37 159.1 135 60.0
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 4.4e-37 158.3 135 58.5
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 2.2e-36 156.0 132 59.1
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 8.2e-36 154.1 129 58.9
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 1.8e-35 152.9 135 60.7
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-35 152.5 132 60.6
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-35 152.1 132 56.1
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 4.1e-35 151.8 132 56.8
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.0e-34 149.4 132 58.3
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-34 149.4 135 52.6
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.5e-34 148.7 134 60.4
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 7.7e-34 147.5 134 61.9
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.7e-33 146.4 132 57.6
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 5.0e-33 144.8 132 58.3
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 2.5e-32 142.5 132 53.0
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 4.2e-32 141.7 134 59.7
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 7.2e-32 141.0 133 58.6
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 1.6e-31 139.8 130 53.8
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 1.6e-31 139.8 130 53.8
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 4.7e-31 138.3 133 59.4
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.0e-30 137.1 133 57.1
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 2.3e-30 136.0 131 54.2
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 2.3e-30 136.0 131 54.2
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 6.7e-30 134.4 132 57.6
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 8.8e-30 134.0 132 47.0
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 1.5e-29 133.3 130 50.8
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 2.6e-29 132.5 132 56.8
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.4e-29 131.7 130 56.2
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 5.7e-29 131.3 130 55.4
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.7e-29 131.3 104 64.4
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 1.3e-28 130.2 130 54.6
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 2.8e-28 129.0 132 55.3
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 2.8e-28 129.0 132 55.3
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 2.8e-28 129.0 135 56.3
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 2.8e-28 129.0 132 55.3
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 6.3e-28 127.9 117 54.7
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 8.2e-28 127.5 110 59.1
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-27 127.1 89 66.3
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.4e-27 126.7 132 56.1
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 5.3e-27 124.8 92 64.1
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 7.0e-27 124.4 104 61.5
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 9.1e-27 124.0 133 46.6
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-26 123.6 135 52.6
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.7e-26 122.5 133 52.6
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 4.5e-26 121.7 134 50.0
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 5.9e-26 121.3 134 49.3
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 7.7e-26 120.9 119 53.8
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.9e-25 119.0 113 54.0
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.8e-25 118.6 131 55.0
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 3.8e-25 118.6 137 46.7
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 3.2e-24 115.5 130 49.2
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 4.2e-24 115.2 135 49.6
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.2e-23 113.6 130 46.2
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 3.0e-22 109.0 128 44.5
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.3e-20 103.6 137 43.1
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.8e-20 102.4 78 65.4
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 2.4e-19 99.4 140 37.9
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-19 99.0 132 42.4
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 7.0e-19 97.8 134 41.0
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 7.0e-19 97.8 140 37.1
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 1.6e-18 96.7 137 40.9
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 7.7e-18 94.4 100 44.0
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 1.3e-17 93.6 76 60.5
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 1.1e-16 90.5 117 41.9
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 9.5e-16 87.4 128 40.6
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 2.1e-15 86.3 134 38.1
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 2.1e-15 86.3 134 38.1
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 3.6e-15 85.5 126 39.7
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 1.8e-14 83.2 136 36.0
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 7.5e-13 77.8 64 57.8
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 9.8e-13 77.4 116 34.5
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 1.3e-12 77.0 90 48.9
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 7.0e-11 71.2 55 61.8
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.6e-10 70.1 55 61.8
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 1.1e-08 63.9 63 47.6
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 7.3e-08 61.2 50 62.0
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 7.3e-08 61.2 142 33.8
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-06 57.0 32 78.1


User provided reference genes

Program Settings