Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 7.5e-147 523.9 270 100.0
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 8.9e-39 164.9 174 54.6
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 3.4e-38 162.9 174 52.3
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 4.4e-38 162.5 180 52.2
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 2.4e-36 156.8 190 48.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 5.4e-36 155.6 182 50.5
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 7.0e-36 155.2 188 47.9
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 7.0e-36 155.2 180 51.1
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 9.2e-36 154.8 195 47.7
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 9.2e-36 154.8 187 47.6
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 1.2e-35 154.5 171 52.6
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.2e-35 154.5 175 53.1
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 1.2e-35 154.5 136 60.3
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 1.6e-35 154.1 181 51.4
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 2.0e-35 153.7 181 47.5
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 2.7e-35 153.3 167 50.3
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 4.6e-35 152.5 184 49.5
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 7.8e-35 151.8 185 48.6
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 7.8e-35 151.8 187 50.8
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 7.8e-35 151.8 104 64.4
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.3e-34 151.0 151 54.3
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.3e-34 151.0 188 48.4
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 2.9e-34 149.8 185 48.1
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 5.0e-34 149.1 167 49.7
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 5.0e-34 149.1 187 48.7
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 2.5e-33 146.7 171 48.5
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 3.3e-33 146.4 167 48.5
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 4.3e-33 146.0 185 46.5
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 4.3e-33 146.0 188 46.8
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 4.3e-33 146.0 190 49.5
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 1.6e-32 144.1 167 50.9
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 2.1e-32 143.7 187 44.9
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 2.1e-32 143.7 187 44.9
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 2.1e-32 143.7 174 49.4
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 2.8e-32 143.3 188 44.7
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.8e-32 143.3 189 48.7
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 3.6e-32 142.9 138 54.3
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 4.7e-32 142.5 111 62.2
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 6.2e-32 142.1 185 46.5
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 6.2e-32 142.1 180 47.8
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 8.0e-32 141.7 193 40.9
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 8.0e-32 141.7 182 45.6
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 1.4e-31 141.0 105 63.8
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 1.4e-31 141.0 180 48.3
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 1.8e-31 140.6 196 43.4
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 2.3e-31 140.2 133 57.1
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 2.3e-31 140.2 176 45.5
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 2.3e-31 140.2 176 45.5
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 3.1e-31 139.8 178 43.8
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 8.9e-31 138.3 151 47.7
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 8.9e-31 138.3 135 53.3
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 1.2e-30 137.9 193 43.5
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.2e-30 137.9 155 51.0
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 1.2e-30 137.9 182 46.7
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.2e-30 137.9 185 44.3
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 2.0e-30 137.1 170 45.9
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 2.0e-30 137.1 175 44.6
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 2.6e-30 136.7 182 45.1
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 2.6e-30 136.7 195 43.1
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 3.4e-30 136.3 199 43.2
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 4.4e-30 136.0 191 42.4
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 4.4e-30 136.0 166 46.4
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 5.8e-30 135.6 196 42.9
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 5.8e-30 135.6 196 42.9
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 7.5e-30 135.2 141 50.4
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 7.5e-30 135.2 141 50.4
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 7.5e-30 135.2 104 55.8
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 7.5e-30 135.2 164 48.2
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 7.5e-30 135.2 175 44.0
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 1.3e-29 134.4 193 42.5
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 1.3e-29 134.4 193 43.0
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.3e-29 134.4 109 56.9
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.3e-29 134.4 202 41.1
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 2.2e-29 133.7 168 50.6
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 2.9e-29 133.3 105 61.9
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 3.7e-29 132.9 192 43.2
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 3.7e-29 132.9 180 42.8
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 6.4e-29 132.1 111 57.7
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 1.1e-28 131.3 182 42.3
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 1.9e-28 130.6 192 40.6
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 7.0e-28 128.6 187 42.8
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 2.7e-27 126.7 192 40.6
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 6.0e-27 125.6 167 42.5
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 6.0e-27 125.6 186 43.5
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 1.3e-26 124.4 108 52.8
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 1.7e-26 124.0 131 51.1
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 2.3e-26 123.6 145 47.6
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 1.1e-25 121.3 197 40.1
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.5e-25 120.9 173 42.2
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 1.9e-25 120.6 198 39.4
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.6e-24 117.5 90 62.2
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 2.1e-24 117.1 150 42.7
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 3.6e-24 116.3 158 46.8
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 6.8e-23 112.1 138 44.9
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 1.5e-22 110.9 158 43.7
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 2.9e-21 106.7 125 49.6
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 2.9e-21 106.7 97 50.5
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 3.7e-21 106.3 171 40.9
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 8.3e-21 105.1 174 39.1
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 4.1e-20 102.8 78 62.8
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 5.4e-20 102.4 115 49.6
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 4.6e-19 99.4 79 59.5
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 1.3e-18 97.8 82 59.8
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 1.3e-18 97.8 159 40.3
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 3.9e-18 96.3 200 37.5
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 5.1e-18 95.9 100 43.0
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 6.6e-18 95.5 104 43.3
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 4.3e-17 92.8 181 37.0
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 5.6e-17 92.4 213 35.2
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 5.6e-17 92.4 213 35.2
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 2.8e-16 90.1 90 53.3
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 6.2e-16 89.0 151 36.4
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 8.1e-16 88.6 73 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 5.2e-15 85.9 118 36.4
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 4.9e-13 79.3 71 52.1
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 6.4e-13 79.0 89 46.1
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.2e-11 74.7 90 46.7
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 8.6e-10 68.6 119 31.1
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.8e-07 60.8 47 57.4


User provided reference genes

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