Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 1.6e-236 822.4 432 100.0
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.7e-137 493.4 436 60.3
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.7e-137 493.4 436 60.3
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 4.0e-134 482.3 436 60.8
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 2.6e-133 479.6 436 59.6
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.3e-132 477.2 437 59.3
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 1.1e-131 474.2 436 58.9
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 4.2e-131 472.2 438 58.7
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.1e-128 464.2 430 58.6
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 2.5e-128 463.0 431 57.5
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 2.5e-128 463.0 436 58.0
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 6.2e-127 458.4 417 60.4
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 6.9e-126 454.9 429 56.9
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 2.6e-125 453.0 436 56.2
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 5.8e-125 451.8 439 58.1
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 2.2e-124 449.9 440 57.5
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 2.9e-124 449.5 444 56.5
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 3.8e-124 449.1 433 58.0
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 6.4e-124 448.4 435 56.6
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 8.4e-124 448.0 439 56.9
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 1.1e-123 447.6 441 57.1
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 3.2e-123 446.0 435 56.3
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 1.6e-122 443.7 431 55.5
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 1.0e-121 441.0 432 55.8
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 1.9e-120 436.8 441 55.1
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 2.5e-120 436.4 439 54.4
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 3.3e-120 436.0 412 57.8
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 9.6e-120 434.5 436 55.5
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 2.8e-119 433.0 413 57.1
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 1.1e-118 431.0 439 54.0
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 5.3e-118 428.7 440 55.2
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 5.3e-118 428.7 410 58.0
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.2e-117 427.6 441 54.6
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 4.5e-117 425.6 435 53.1
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 7.6e-117 424.9 441 54.6
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 7.6e-117 424.9 410 53.7
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.2e-115 419.1 438 54.1
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 9.3e-115 417.9 433 52.9
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 9.3e-115 417.9 441 54.4
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 7.9e-114 414.8 434 52.5
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 7.9e-114 414.8 407 53.6
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 1.0e-113 414.5 434 51.8
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 1.3e-113 414.1 390 56.7
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 1.3e-113 414.1 429 51.7
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 5.1e-113 412.1 434 51.2
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 6.7e-113 411.8 430 50.9
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 1.5e-112 410.6 434 51.8
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 4.3e-112 409.1 406 53.2
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 7.4e-112 408.3 407 53.1
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 2.8e-111 406.4 434 51.2
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 4.8e-111 405.6 429 49.2
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 6.2e-111 405.2 407 52.6
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 8.1e-111 404.8 434 50.7
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 3.1e-110 402.9 406 52.2
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 2.6e-109 399.8 415 54.0
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 2.6e-109 399.8 406 51.7
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 3.4e-109 399.4 410 51.5
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.0e-108 397.9 349 60.7
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 1.3e-108 397.5 437 51.9
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 4.9e-108 395.6 435 50.3
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 9.3e-107 391.3 437 51.9
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 3.3e-104 382.9 461 47.5
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 5.7e-104 382.1 405 50.6
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 7.4e-104 381.7 431 47.8
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.6e-103 380.6 442 49.1
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 2.1e-103 380.2 429 49.2
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 4.8e-103 379.0 408 49.8
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 8.2e-103 378.3 407 50.6
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 9.0e-102 374.8 406 50.2
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 9.0e-102 374.8 407 50.9
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.5e-101 374.0 430 48.4
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.3e-100 370.9 405 49.1
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 2.2e-100 370.2 436 48.2
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 2.9e-100 369.8 442 47.1
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 3.8e-100 369.4 300 62.7
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 5.5e-99 365.5 369 50.1
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 5.5e-99 365.5 352 58.0
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.1e-98 363.6 370 53.8
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 7.9e-98 361.7 366 53.6
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 4.8e-95 352.4 410 48.5
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 6.3e-95 352.1 431 48.5
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 5.0e-92 342.4 405 46.7
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 2.7e-90 336.7 411 45.0
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 3.6e-90 336.3 352 58.5
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 2.8e-87 326.6 366 49.2
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 8.2e-87 325.1 417 42.9
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 3.1e-86 323.2 355 53.2
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 2.5e-83 313.5 433 41.6
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.5e-80 304.3 424 42.0
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 8.5e-76 288.5 345 50.1
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.6e-72 276.9 365 45.8
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.4e-70 271.2 271 56.5
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 2.9e-68 263.5 446 35.0
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 1.9e-67 260.8 397 40.8
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 3.7e-63 246.5 382 39.8
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 3.6e-58 229.9 419 33.7
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 2.3e-57 227.3 427 34.4
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 2.6e-56 223.8 242 48.3
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 9.1e-54 215.3 206 51.9
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 2.5e-51 207.2 200 49.0
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 7.5e-40 169.1 207 51.2
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 1.9e-27 127.9 200 39.0
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 6.8e-25 119.4 87 63.2
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.2e-18 96.3 98 53.1
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.2e-16 92.0 62 56.5
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 7.6e-16 89.4 57 59.6
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 1.4e-14 85.1 271 28.4
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.4e-14 85.1 62 53.2
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 4.3e-11 73.6 113 45.1
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.9e-07 60.1 32 71.9
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 8.4e-07 59.3 105 41.9


User provided reference genes

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