Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 4.7e-100 367.9 183 100.0
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 5.8e-50 201.4 185 62.2
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 7.1e-48 194.5 153 67.3
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 9.2e-48 194.1 146 66.4
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 9.2e-48 194.1 146 66.4
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 9.2e-48 194.1 184 61.4
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.6e-47 193.4 184 62.0
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.7e-47 192.6 191 59.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 4.6e-47 191.8 178 59.6
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.3e-46 190.3 184 60.9
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.3e-46 190.3 158 63.9
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.3e-46 190.3 158 63.9
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 3.9e-46 188.7 148 64.9
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 1.1e-45 187.2 187 59.4
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 3.3e-45 185.7 112 82.1
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 3.3e-45 185.7 135 67.4
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 3.3e-45 185.7 165 59.4
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 3.3e-45 185.7 187 59.4
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 5.6e-45 184.9 157 62.4
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 7.3e-45 184.5 106 84.0
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 7.3e-45 184.5 153 64.1
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 1.2e-44 183.7 107 80.4
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 2.8e-44 182.6 185 57.8
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 2.8e-44 182.6 122 74.6
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 4.7e-44 181.8 108 79.6
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 1.4e-43 180.3 110 77.3
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.4e-43 180.3 110 77.3
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.8e-43 179.9 182 57.7
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.8e-43 179.9 147 63.9
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 2.4e-43 179.5 160 58.8
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 2.4e-43 179.5 102 81.4
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 3.1e-43 179.1 133 66.2
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 3.1e-43 179.1 109 78.0
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 6.9e-43 177.9 132 66.7
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 6.9e-43 177.9 181 56.4
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 9.0e-43 177.6 135 63.7
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 1.5e-42 176.8 149 62.4
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 2.0e-42 176.4 117 72.6
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 2.6e-42 176.0 159 61.6
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 3.4e-42 175.6 115 72.2
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 3.4e-42 175.6 165 56.4
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 4.4e-42 175.3 108 76.9
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 4.4e-42 175.3 108 76.9
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 5.8e-42 174.9 109 72.5
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 5.8e-42 174.9 173 58.4
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 1.7e-41 173.3 114 71.9
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 1.7e-41 173.3 194 54.1
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 2.9e-41 172.6 114 73.7
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 4.9e-41 171.8 107 74.8
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 4.9e-41 171.8 186 53.2
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 6.4e-41 171.4 111 73.9
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 6.4e-41 171.4 172 59.3
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 8.4e-41 171.0 121 70.2
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.4e-40 170.2 152 58.6
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.4e-40 170.2 109 72.5
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.4e-40 170.2 136 61.0
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.4e-40 170.2 142 64.1
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 1.9e-40 169.9 109 71.6
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 1.9e-40 169.9 133 62.4
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 2.4e-40 169.5 121 64.5
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 2.4e-40 169.5 102 78.4
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 3.2e-40 169.1 154 57.8
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 7.1e-40 167.9 161 57.1
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 7.1e-40 167.9 109 72.5
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 9.3e-40 167.5 111 72.1
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 1.6e-39 166.8 113 68.1
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 2.1e-39 166.4 167 57.5
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 2.1e-39 166.4 103 73.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 2.7e-39 166.0 102 74.5
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 3.5e-39 165.6 116 67.2
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 4.6e-39 165.2 116 65.5
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 6.0e-39 164.9 109 73.4
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 7.8e-39 164.5 110 71.8
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 7.8e-39 164.5 115 67.8
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 1.0e-38 164.1 101 75.2
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.7e-38 163.3 103 75.7
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 1.7e-38 163.3 102 71.6
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 2.3e-38 162.9 177 49.7
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 2.3e-38 162.9 159 56.0
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 2.3e-38 162.9 159 56.0
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 2.3e-38 162.9 159 56.0
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 2.3e-38 162.9 109 72.5
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 2.3e-38 162.9 102 70.6
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 3.9e-38 162.2 102 70.6
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 8.7e-38 161.0 128 63.3
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 1.5e-37 160.2 158 56.3
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.9e-37 159.8 116 69.0
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.5e-37 159.5 182 48.9
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.5e-37 159.5 182 48.9
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 3.3e-37 159.1 124 65.3
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.1e-35 154.1 108 68.5
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.1e-35 154.1 86 86.0
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 4.0e-35 152.1 125 59.2
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 9.0e-35 151.0 99 73.7
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 3.4e-34 149.1 86 81.4
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 4.5e-34 148.7 106 64.2
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 4.5e-34 148.7 105 62.9
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 9.9e-34 147.5 167 49.1
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.4e-32 143.7 180 46.7
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 4.6e-31 138.7 155 47.1
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 4.6e-31 138.7 155 47.1
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 7.9e-31 137.9 89 74.2
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 1.9e-29 133.3 109 54.1
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 9.0e-27 124.4 110 52.7
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.6e-12 77.0 65 58.5


User provided reference genes

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