Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.2e-310 1068.9 519 100.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 2.2e-235 818.9 513 75.0
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 7.7e-233 810.4 505 75.4
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 3.8e-232 808.1 503 74.2
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 5.0e-232 807.7 499 76.0
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.1e-231 806.6 504 76.6
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.5e-231 805.4 500 75.6
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 2.5e-231 805.4 511 74.0
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.5e-231 805.4 498 74.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 4.7e-230 801.2 498 74.7
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 8.0e-230 800.4 502 76.1
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.0e-229 798.5 508 74.2
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.2e-228 796.6 508 75.0
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 1.5e-228 796.2 492 75.0
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 3.4e-228 795.0 519 73.6
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 7.5e-228 793.9 503 73.6
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.3e-227 793.1 509 73.5
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 2.2e-227 792.3 511 72.8
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 3.7e-227 791.6 504 72.4
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.4e-226 789.6 508 74.8
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.8e-226 789.3 508 72.4
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.4e-226 788.9 508 72.4
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 4.1e-226 788.1 506 75.5
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 3.5e-225 785.0 495 74.3
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 1.7e-224 782.7 504 73.4
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 1.7e-224 782.7 497 74.0
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 3.8e-224 781.6 504 72.0
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 5.0e-224 781.2 500 73.2
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 6.6e-224 780.8 506 72.1
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 4.2e-223 778.1 490 72.7
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.2e-223 777.3 509 72.3
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.6e-222 776.2 505 73.3
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 6.1e-222 774.2 505 73.1
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.3e-221 772.3 514 72.0
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 3.0e-221 771.9 496 71.8
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 4.0e-221 771.5 499 72.1
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 8.9e-221 770.4 509 71.3
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 7.5e-220 767.3 501 70.9
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.3e-219 766.5 497 72.6
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.1e-218 763.5 495 70.7
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.4e-218 763.1 505 71.1
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 2.4e-218 762.3 487 72.9
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.4e-218 762.3 505 71.7
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 4.1e-218 761.5 509 70.3
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 7.0e-218 760.8 512 70.7
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 9.2e-218 760.4 485 72.8
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.2e-217 760.0 503 71.6
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.0e-217 759.2 505 69.9
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.7e-217 758.8 508 71.3
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 4.6e-217 758.1 482 72.4
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 1.3e-216 756.5 515 70.1
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 1.3e-216 756.5 497 70.8
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.3e-216 755.7 512 68.8
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.0e-216 754.6 508 70.7
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 1.1e-215 753.4 505 70.9
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 1.9e-215 752.7 520 69.0
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.9e-215 752.7 505 70.3
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 3.3e-215 751.9 502 70.3
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 4.3e-215 751.5 510 69.4
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 5.6e-215 751.1 504 69.8
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 9.5e-215 750.4 536 67.4
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.8e-214 748.8 506 71.7
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.1e-213 745.3 506 71.5
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 7.5e-212 740.7 504 69.2
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 9.8e-212 740.3 465 75.5
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 8.3e-211 737.3 485 69.7
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.9e-210 736.1 507 68.6
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 3.2e-210 735.3 504 69.6
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 3.2e-210 735.3 518 66.6
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 4.1e-210 734.9 455 74.5
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 5.4e-210 734.6 487 69.6
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 7.0e-210 734.2 503 70.0
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 2.7e-209 732.3 500 70.0
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.5e-209 731.9 472 73.1
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 7.8e-209 730.7 503 69.4
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 7.8e-209 730.7 503 69.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 7.8e-209 730.7 503 69.4
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.0e-208 728.8 477 71.9
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 3.0e-208 728.8 493 69.6
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 2.1e-206 722.6 480 70.8
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 5.2e-205 718.0 521 66.4
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.2e-205 718.0 522 67.0
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 4.4e-204 714.9 504 67.9
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 4.4e-204 714.9 519 65.9
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 4.1e-202 708.4 491 69.5
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 5.4e-202 708.0 477 67.7
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 9.2e-202 707.2 459 71.7
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.7e-201 705.7 550 64.2
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.3e-200 703.4 491 67.8
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 4.3e-199 698.4 521 64.5
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 8.9e-197 690.6 460 70.4
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 8.9e-197 690.6 517 63.6
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.9e-194 682.9 517 65.2
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.9e-191 672.9 482 67.6
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 3.8e-179 632.1 511 62.4
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 7.4e-167 591.3 500 56.2
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 3.0e-160 569.3 379 71.0
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 6.7e-152 541.6 371 69.5
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 2.5e-146 523.1 339 70.8
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 2.5e-143 513.1 353 67.7
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 3.6e-137 492.7 362 65.7
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.9e-123 446.4 501 49.9
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.2e-120 435.6 299 69.6
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.8e-117 427.2 309 66.7
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.5e-95 354.4 230 66.5
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 6.8e-88 328.9 214 65.9
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.5e-74 283.9 178 76.4
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.4e-69 268.1 183 68.3
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 4.5e-63 246.5 149 77.2
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 5.1e-59 233.0 148 66.9
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 4.2e-21 107.1 104 57.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.3e-14 85.5 53 66.0
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 2.5e-13 81.3 78 51.3
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 2.6e-10 71.2 79 46.8
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 1.6e-07 62.0 44 65.9


User provided reference genes

Program Settings