Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 5.6e-118 427.6 206 100.0
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 7.4e-70 267.7 211 66.4
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 2.8e-69 265.8 211 66.4
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 6.3e-69 264.6 211 64.5
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 1.1e-68 263.8 208 65.4
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 3.1e-68 262.3 211 64.5
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 4.1e-68 261.9 208 64.4
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 4.5e-67 258.5 208 65.9
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.4e-65 253.4 208 63.9
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 2.5e-65 252.7 218 60.1
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 3.6e-64 248.8 218 59.2
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 7.9e-64 247.7 217 59.0
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.4e-63 246.9 209 61.7
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.3e-63 246.1 216 60.6
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 6.7e-63 244.6 229 59.0
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.8e-63 244.2 216 60.6
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 4.4e-62 241.9 200 61.5
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 7.4e-62 241.1 205 57.6
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.3e-61 240.4 204 59.8
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.3e-61 240.4 216 60.2
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 4.8e-61 238.4 202 59.4
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.8e-60 236.5 204 56.9
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.1e-60 235.3 215 58.6
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 5.3e-60 235.0 217 60.4
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 1.5e-59 233.4 208 59.1
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 7.7e-59 231.1 216 57.9
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 1.0e-58 230.7 201 58.7
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.3e-58 230.3 216 57.4
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.3e-58 230.3 204 56.9
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.9e-58 229.2 204 58.8
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.4e-55 220.3 204 55.9
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 5.2e-55 218.4 213 54.0
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 6.7e-55 218.0 206 54.9
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 1.1e-54 217.2 204 53.9
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 1.1e-54 217.2 206 56.3
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 2.0e-54 216.5 205 54.1
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.4e-54 214.5 214 54.7
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 9.7e-54 214.2 202 53.5
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 9.7e-54 214.2 214 54.2
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 9.7e-54 214.2 206 56.3
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.1e-52 210.7 206 53.4
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 5.3e-52 208.4 175 58.9
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 1.6e-51 206.8 202 52.5
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 1.6e-51 206.8 213 50.7
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.0e-50 204.1 206 52.9
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 3.8e-50 202.2 204 52.0
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 5.0e-50 201.8 216 50.0
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 2.6e-46 189.5 203 50.7
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 4.8e-45 185.3 181 51.9
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 4.1e-44 182.2 149 59.7
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 2.0e-43 179.9 198 47.0
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 5.9e-43 178.3 148 59.5
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.0e-42 177.6 194 46.9
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 4.2e-41 172.2 139 59.7
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 7.2e-41 171.4 149 56.4
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.0e-39 166.0 212 48.1
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 3.7e-37 159.1 111 70.3
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 2.4e-36 156.4 222 43.7
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.3e-34 150.6 116 65.5
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 2.5e-33 146.4 139 51.8
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 1.7e-29 133.7 112 57.1
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.8e-28 130.2 173 42.8
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.8e-28 130.2 134 55.2
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 2.4e-28 129.8 110 55.5
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 3.1e-28 129.4 125 55.2
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.2e-27 127.5 100 60.0
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 2.7e-27 126.3 161 43.5
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 4.5e-27 125.6 180 40.6
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 5.9e-27 125.2 93 65.6
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 8.0e-24 114.8 107 54.2
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 1.4e-23 114.0 216 37.5
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 1.5e-22 110.5 119 49.6
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.7e-21 107.1 91 57.1
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 8.3e-21 104.8 90 56.7
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 8.3e-21 104.8 100 56.0
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 3.2e-20 102.8 92 56.5
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 5.6e-17 92.0 90 50.0
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.6e-16 89.4 84 56.0
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 1.2e-11 74.3 56 62.5


User provided reference genes

Program Settings