Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 8.6e-69 263.5 127 100.0
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 9.3e-47 190.3 118 78.8
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 9.3e-47 190.3 124 73.4
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.6e-46 189.5 119 76.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.6e-46 189.5 118 78.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 4.6e-46 188.0 123 74.8
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 4.6e-46 188.0 118 77.1
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 7.8e-46 187.2 120 76.7
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 2.3e-45 185.7 121 74.4
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 3.9e-45 184.9 121 74.4
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.1e-45 184.5 123 74.0
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 5.1e-45 184.5 120 73.3
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 6.6e-45 184.1 117 76.9
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.1e-44 183.3 118 75.4
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.9e-44 182.6 123 72.4
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.5e-44 182.2 117 76.1
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 3.3e-44 181.8 122 73.0
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 4.3e-44 181.4 126 71.4
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 4.3e-44 181.4 126 70.6
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 5.6e-44 181.0 120 71.7
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 5.6e-44 181.0 127 69.3
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 5.6e-44 181.0 125 71.2
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 9.6e-44 180.3 118 75.4
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.3e-43 179.9 123 70.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 1.3e-43 179.9 117 74.4
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.3e-43 179.9 120 71.7
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.3e-43 179.9 121 72.7
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 2.1e-43 179.1 129 69.0
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 2.8e-43 178.7 120 69.2
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 6.2e-43 177.6 125 70.4
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 6.2e-43 177.6 126 67.5
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 6.2e-43 177.6 120 70.8
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.1e-43 177.2 126 69.8
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.1e-42 176.8 126 67.5
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.4e-42 176.4 120 73.3
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 3.1e-42 175.3 125 69.6
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 6.9e-42 174.1 123 68.3
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.2e-41 173.3 124 69.4
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 1.5e-41 172.9 113 75.2
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 2.0e-41 172.6 118 68.6
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 2.6e-41 172.2 119 63.9
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 7.6e-41 170.6 120 70.0
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.3e-40 169.9 125 64.0
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 2.2e-40 169.1 118 66.1
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.9e-40 168.7 120 66.7
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.9e-40 168.7 128 66.4
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 3.8e-40 168.3 119 63.0
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 3.8e-40 168.3 126 65.1
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 4.9e-40 167.9 116 64.7
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 8.4e-40 167.2 116 63.8
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.1e-39 166.8 119 61.3
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.9e-39 166.0 107 76.6
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 2.4e-39 165.6 119 62.2
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 2.4e-39 165.6 119 62.2
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 2.4e-39 165.6 119 62.2
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 2.4e-39 165.6 119 62.2
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 3.2e-39 165.2 116 62.1
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 3.2e-39 165.2 118 61.9
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 3.2e-39 165.2 120 66.7
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 5.4e-39 164.5 141 58.9
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 5.4e-39 164.5 126 61.9
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.2e-38 163.3 122 62.3
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.6e-38 162.9 125 66.4
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.6e-38 162.9 125 63.2
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 2.1e-38 162.5 121 63.6
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.7e-38 162.2 116 61.2
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 4.6e-38 161.4 119 58.0
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.0e-37 160.2 116 60.3
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.3e-37 159.8 127 59.1
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.3e-37 159.8 127 61.4
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 2.3e-37 159.1 120 65.8
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.0e-37 158.7 151 57.0
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 3.9e-37 158.3 125 64.8
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 6.7e-37 157.5 104 74.0
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 3.3e-36 155.2 113 65.5
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.3e-36 154.8 117 63.2
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 4.8e-35 151.4 102 70.6
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.8e-35 151.4 98 75.5
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 4.0e-34 148.3 121 63.6
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 2.6e-33 145.6 114 63.2
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 5.8e-33 144.4 120 60.0
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.1e-28 130.2 120 56.7
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.8e-26 122.9 121 51.2
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 1.5e-25 119.8 77 71.4
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 4.9e-24 114.8 121 46.3
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.9e-23 112.8 120 47.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.9e-23 112.8 80 70.0
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.7e-22 109.0 80 65.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 7.4e-20 100.9 95 57.9
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 2.8e-19 99.0 114 47.4
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 2.4e-18 95.9 59 78.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.0e-16 90.5 87 58.6
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 2.5e-15 85.9 102 47.1
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 6.9e-10 67.8 86 44.2
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 5.0e-08 61.6 92 42.4
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.1e-07 60.5 46 60.9


User provided reference genes

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