Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 8.7e-274 946.4 498 100.0
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 6.6e-189 664.5 497 72.2
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 5.2e-186 654.8 497 71.2
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 2.2e-184 649.4 499 71.3
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 7.8e-182 641.0 500 69.2
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.7e-181 639.8 504 70.6
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 2.3e-181 639.4 500 68.8
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 5.6e-180 634.8 497 68.6
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 5.6e-180 634.8 497 68.6
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 2.3e-178 629.4 500 67.6
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 6.8e-178 627.9 498 67.3
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 6.8e-178 627.9 513 68.2
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 8.9e-178 627.5 502 68.1
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.5e-177 626.7 497 67.6
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.0e-177 626.3 496 67.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 4.4e-177 625.2 500 67.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 4.4e-177 625.2 496 68.8
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 7.5e-177 624.4 499 67.3
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 2.2e-176 622.9 496 68.3
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 4.1e-175 618.6 496 67.1
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 4.1e-175 618.6 495 67.9
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.0e-173 614.0 500 66.6
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.1e-172 610.5 501 67.1
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.5e-172 610.1 501 66.3
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 2.1e-171 606.3 497 68.0
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 4.7e-171 605.1 501 66.9
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 6.2e-171 604.7 496 66.1
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.8e-170 603.2 498 65.3
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 3.1e-170 602.4 498 65.3
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 4.0e-170 602.1 498 65.1
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.5e-169 600.1 495 65.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 3.4e-169 599.0 498 65.7
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.9e-168 595.9 498 64.7
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 3.7e-168 595.5 499 65.9
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 8.4e-168 594.3 501 66.7
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 8.4e-168 594.3 488 67.0
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 4.1e-167 592.0 505 63.6
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 1.6e-166 590.1 500 65.8
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 6.6e-165 584.7 496 63.5
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 6.6e-165 584.7 526 63.1
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 1.1e-164 583.9 502 63.3
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 7.3e-164 581.3 504 64.5
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 4.0e-162 575.5 517 63.1
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 6.8e-162 574.7 503 62.8
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 8.9e-162 574.3 503 64.0
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 7.6e-161 571.2 503 63.6
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.3e-160 570.5 522 62.1
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 2.9e-160 569.3 509 62.1
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.4e-159 567.0 496 62.3
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 3.2e-159 565.8 495 62.2
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.2e-158 563.9 507 61.7
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 1.6e-158 563.5 503 61.2
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.0e-157 560.8 497 62.6
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.3e-157 560.5 498 62.0
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.3e-157 559.7 515 62.9
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.5e-156 557.0 498 61.8
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 7.3e-156 554.7 556 58.8
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 1.3e-155 553.9 498 60.6
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.0e-153 546.6 505 61.8
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 5.8e-153 545.0 507 60.7
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.7e-152 543.5 496 60.9
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.9e-152 542.7 513 60.0
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.1e-150 536.6 510 58.4
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 6.0e-150 535.0 522 59.2
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 5.1e-149 531.9 511 58.3
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 5.1e-149 531.9 508 61.0
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 4.8e-147 525.4 520 57.9
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 6.2e-147 525.0 514 58.9
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.8e-146 523.5 508 59.3
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.5e-145 520.4 502 59.8
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 3.4e-145 519.2 516 58.9
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.3e-144 517.3 509 58.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 3.8e-144 515.8 516 57.0
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.9e-143 513.5 502 58.4
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 4.6e-142 508.8 514 57.2
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 4.6e-142 508.8 520 57.1
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.5e-140 503.1 547 55.4
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 9.6e-140 501.1 533 57.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.4e-138 496.5 512 57.6
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 4.0e-138 495.7 509 56.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.8e-136 489.2 501 57.3
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.4e-135 487.3 511 57.3
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 2.5e-135 486.5 506 57.5
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 3.5e-134 482.6 510 57.1
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 4.6e-134 482.3 407 63.1
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 4.3e-132 475.7 509 56.2
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 5.7e-132 475.3 509 56.0
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.1e-130 471.1 510 54.7
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.1e-130 471.1 510 52.7
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 7.6e-129 464.9 498 56.4
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 2.8e-123 446.4 359 66.6
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 4.8e-123 445.7 501 54.3
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.2e-121 441.0 514 52.3
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.2e-120 436.8 353 65.7
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 7.4e-116 421.8 365 65.2
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.7e-110 402.5 521 47.6
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 5.1e-109 399.1 331 65.6
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.0e-104 384.8 499 48.7
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 8.8e-101 371.7 518 45.8
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 6.8e-85 318.9 352 55.1
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 5.7e-84 315.8 741 34.8
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.0e-65 254.2 189 68.8
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.3e-63 246.5 358 43.3
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 9.5e-63 245.4 566 35.2
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 5.4e-42 176.4 188 54.8
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.2e-36 158.7 322 40.7
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 8.4e-35 152.5 144 58.3
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.5e-28 131.7 341 37.0
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.9e-23 114.8 108 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.5e-15 88.6 149 40.9
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 2.5e-07 61.2 64 53.1
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 5.7e-07 60.1 67 49.3
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 2.2e-06 58.2 68 45.6
TPR.G15786 Trifolium pratense HOM05D004574 ORTHO05D005612 2.2e-06 58.2 95 41.1
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 2.2e-06 58.2 69 40.6
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 2.2e-06 58.2 69 40.6
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 2.8e-06 57.8 62 46.8
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 2.8e-06 57.8 69 42.0
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 3.7e-06 57.4 63 46.0
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 3.7e-06 57.4 53 52.8
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 3.7e-06 57.4 43 72.1
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 4.8e-06 57.0 71 45.1
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 4.8e-06 57.0 49 55.1
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 4.8e-06 57.0 61 45.9
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 8.2e-06 56.2 71 43.7


User provided reference genes

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