Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0061 Cannabis sativa HOM05D015079 ORTHO05D000167 6.0e-83 310.8 162 100.0
CANSAT25G1547 Cannabis sativa HOM05D015079 ORTHO05D000167 9.6e-65 250.4 143 84.6
CANSAT01G3235 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-63 243.8 140 86.4
CANSAT11G0676 Cannabis sativa HOM05D015079 ORTHO05D000167 1.5e-62 243.0 143 83.2
CANSAT64G2041 Cannabis sativa HOM05D015079 ORTHO05D000167 1.0e-53 213.8 122 90.2
CANSAT35G1823 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-36 156.8 137 59.1
CANSAT35G0410 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-36 155.2 143 53.1
CANSAT25G1545 Cannabis sativa HOM05D000003 ORTHO05D000004 7.2e-36 154.5 137 56.9
CANSAT54G0106 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-34 150.6 148 54.7
CANSAT11G1492 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-34 149.8 138 55.8
CANSAT35G1852 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-34 149.8 144 53.5
CANSAT56G1101 Cannabis sativa HOM05D015079 ORTHO05D000167 2.0e-33 146.4 143 54.5
CANSAT21G2489 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-33 146.0 146 50.7
CANSAT80G0722 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-33 145.6 142 52.1
CANSAT56G3861 Cannabis sativa HOM05D000003 ORTHO05D000004 8.2e-32 141.0 137 52.6
CANSAT35G1614 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-31 139.8 150 49.3
CANSAT64G0879 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-31 139.0 158 47.5
CANSAT56G0228 Cannabis sativa HOM05D015079 ORTHO05D000167 2.5e-28 129.4 143 50.3
CANSAT25G2738 Cannabis sativa HOM05D015079 ORTHO05D000167 1.0e-26 124.0 134 52.2
CANSAT80G2194 Cannabis sativa HOM05D015079 ORTHO05D000167 3.0e-26 122.5 136 44.1
CANSAT80G1973 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-25 120.6 139 43.9
CANSAT11G1324 Cannabis sativa HOM05D000003 ORTHO05D000004 5.7e-25 118.2 116 55.2
CANSAT56G1996 Cannabis sativa HOM05D000003 ORTHO05D000004 8.2e-24 114.4 139 41.7
CANSAT01G1233 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-23 111.3 129 48.8
CANSAT56G4495 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-20 102.8 108 50.9
CANSAT80G0283 Cannabis sativa HOM05D000003 ORTHO05D000004 5.5e-20 101.7 138 38.4
CANSAT35G1518 Cannabis sativa HOM05D000003 ORTHO05D000004 8.0e-19 97.8 138 37.0
CANSAT35G0288 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-18 96.7 134 37.3
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-18 95.9 139 35.3
CANSAT80G2229 Cannabis sativa HOM05D000003 ORTHO05D000004 8.8e-18 94.4 137 35.8
CANSAT56G3747 Cannabis sativa HOM05D000003 ORTHO05D000167 8.3e-16 87.8 138 33.3
CANSAT11G0106 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-15 86.7 108 38.0
CANSAT80G1791 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-15 85.9 138 31.2
CANSAT25G3483 Cannabis sativa HOM05D000003 ORTHO05D000167 7.0e-15 84.7 138 34.1
CANSAT64G1529 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-14 84.0 134 34.3
CANSAT35G0293 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-14 83.6 141 33.3
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-14 83.6 148 32.4
CANSAT01G0512 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-14 82.8 137 34.3
CANSAT64G1660 Cannabis sativa HOM05D000003 ORTHO05D000004 7.7e-14 81.3 133 33.8
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-13 80.1 141 31.9
CANSAT78G1174 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-13 79.3 129 35.7
CANSAT11G1907 Cannabis sativa HOM05D000003 ORTHO05D000167 5.0e-13 78.6 142 30.3
CANSAT80G1620 Cannabis sativa HOM05D015079 ORTHO05D000167 5.0e-13 78.6 74 52.7
CANSAT21G1936 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-12 77.0 134 33.6
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-12 76.6 145 31.0
CANSAT25G1531 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-12 76.6 133 32.3
CANSAT64G1526 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-12 76.6 130 30.8
CANSAT25G2392 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-12 76.3 140 32.9
CANSAT78G2184 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-12 76.3 66 57.6
CANSAT78G1465 Cannabis sativa HOM05D000003 ORTHO05D000004 5.5e-12 75.1 129 30.2
CANSAT01G2496 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-12 74.7 138 29.0
CANSAT01G1630 Cannabis sativa HOM05D000003 ORTHO05D000167 9.5e-12 74.3 142 28.9
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-11 73.6 123 31.7
CANSAT64G2042 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-11 73.6 146 28.8
CANSAT01G2953 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-11 72.8 141 29.8
CANSAT64G2575 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-11 72.8 128 35.2
CANSAT11G0632 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-11 72.0 138 28.3
CANSAT25G1542 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-11 72.0 138 28.3
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-11 72.0 138 29.7
CANSAT21G2622 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-11 71.6 138 31.2
CANSAT64G2879 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-11 71.6 145 26.9
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 8.0e-11 71.2 145 31.7
CANSAT56G0342 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-11 71.2 142 31.7
CANSAT78G2161 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-11 71.2 138 28.3
Atru.chr9.1010 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-10 70.5 138 34.1
CANSAT11G2485 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-10 70.1 142 28.2
CANSAT80G2272 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-10 69.7 99 37.4
CANSAT01G3112 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-10 69.3 138 29.0
CANSAT35G0498 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-10 69.3 139 26.6
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-10 69.3 128 28.9
CANSAT21G1904 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-10 68.9 128 35.2
CANSAT35G0664 Cannabis sativa HOM05D000003 ORTHO05D000167 4.0e-10 68.9 139 30.2
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 5.2e-10 68.6 138 33.3
CANSAT01G1430 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-10 68.6 137 27.7
CANSAT25G0454 Cannabis sativa HOM05D000003 ORTHO05D000167 5.2e-10 68.6 133 27.1
CANSAT64G2594 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-09 67.4 123 28.5
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-09 67.0 141 31.2
CANSAT21G0284 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-09 67.0 136 27.9
CANSAT35G1830 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-09 67.0 138 27.5
CANSAT37G0018 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-09 67.0 137 27.0
CANSAT54G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-09 67.0 138 28.3
CANSAT64G0505 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-09 67.0 145 28.3
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-09 66.6 141 32.6
CANSAT11G0084 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-09 66.6 148 27.7
Atru.chr11.167 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-09 66.2 141 31.9
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-09 65.9 138 26.8
CANSAT56G3043 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-09 65.5 138 27.5
CANSAT25G1672 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-09 65.1 138 30.4
CANSAT21G2477 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-09 64.7 128 31.2
CANSAT25G1326 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-09 64.7 58 53.4
CANSAT80G1457 Cannabis sativa HOM05D000003 ORTHO05D000167 7.5e-09 64.7 132 28.8
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 9.8e-09 64.3 142 30.3
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-09 64.3 139 27.3
CANSAT78G2022 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-09 64.3 139 28.1
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-08 63.9 143 32.2
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-08 63.9 143 33.6
CANSAT25G0112 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-08 63.5 143 31.5
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-08 63.2 142 30.3
CANSAT25G0727 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-08 63.2 135 28.1
CANSAT56G2910 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-08 62.8 132 29.5
CANSAT80G1428 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-08 62.8 125 30.4
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-08 62.4 138 31.2
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-08 62.0 142 33.8
CANSAT01G1560 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-08 62.0 142 29.6
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-08 62.0 152 29.6
CANSAT80G1228 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-08 62.0 144 25.7
Lj5C171G21 Lonicera japonica HOM05D000003 ORTHO05D000167 8.3e-08 61.2 140 29.3
Atru.chr1.1585 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-07 60.8 144 29.2
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-07 60.5 141 27.0
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-07 59.7 134 31.3
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-07 59.7 141 29.8
Atru.chr2.49 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-07 59.7 138 30.4
CANSAT25G0663 Cannabis sativa HOM05D000003 ORTHO05D000167 4.1e-07 58.9 142 27.5
CANSAT01G0882 Cannabis sativa HOM05D000003 ORTHO05D000167 5.4e-07 58.5 138 26.8
CANSAT11G0573 Cannabis sativa HOM05D000003 ORTHO05D000167 5.4e-07 58.5 151 28.5
CANSAT56G4436 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-07 58.5 131 29.8
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 142 28.2
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 141 25.5
CANSAT35G1604 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-07 58.2 141 29.1
CANSAT54G2816 Cannabis sativa HOM05D000003 ORTHO05D000167 7.0e-07 58.2 123 31.7
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-07 57.8 146 32.2
Atru.chr10.8 Acer truncatum HOM05D000003 ORTHO05D000167 9.2e-07 57.8 145 29.7
CANSAT78G2368 Cannabis sativa HOM05D000003 ORTHO05D000167 9.2e-07 57.8 145 26.9
CANSAT78G1794 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 57.4 142 27.5
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.2e-06 57.4 139 28.1
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 57.0 138 32.6
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 1.6e-06 57.0 144 31.2
Atru.chr6.1733 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 57.0 141 27.0
CANSAT11G0285 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.0 125 32.0
CANSAT21G0362 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.0 139 28.1
CANSAT56G0050 Cannabis sativa HOM05D000031 ORTHO05D000030 1.6e-06 57.0 139 26.6
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-06 56.6 141 29.1
CANSAT64G1068 Cannabis sativa HOM05D000003 ORTHO05D000167 2.0e-06 56.6 109 30.3
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 2.7e-06 56.2 142 29.6
CANSAT21G2373 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-06 56.2 127 30.7
CANSAT64G1939 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-06 56.2 144 30.6
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-06 56.2 151 30.5
CANSAT80G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-06 55.8 125 31.2
CANSAT11G1145 Cannabis sativa HOM05D000003 ORTHO05D000167 4.5e-06 55.5 122 30.3
CANSAT54G1759 Cannabis sativa HOM05D000003 ORTHO05D000167 4.5e-06 55.5 145 33.1
Atru.chr4.85 Acer truncatum HOM05D000003 ORTHO05D000167 5.9e-06 55.1 143 31.5
CANSAT01G1902 Cannabis sativa HOM05D000003 ORTHO05D000167 5.9e-06 55.1 139 28.8
CANSAT35G0331 Cannabis sativa HOM05D000003 ORTHO05D000004 5.9e-06 55.1 126 31.7
Sed0017730 Sechium edule HOM05D000003 ORTHO05D000004 5.9e-06 55.1 145 29.0
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 7.7e-06 54.7 143 28.7
CANSAT54G0374 Cannabis sativa HOM05D000003 ORTHO05D000004 7.7e-06 54.7 134 28.4


User provided reference genes

Program Settings