Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 3.4e-56 221.5 116 100.0
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.9e-46 189.1 109 87.2
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.7e-45 185.3 109 86.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 3.6e-45 184.9 109 85.3
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.4e-44 183.0 107 85.0
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.5e-43 179.5 110 82.7
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.0e-43 179.1 103 86.4
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 5.7e-43 177.6 105 85.7
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 5.7e-43 177.6 110 80.9
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 7.4e-43 177.2 109 83.5
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.3e-42 176.4 104 82.7
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 1.7e-42 176.0 104 82.7
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 2.2e-42 175.6 114 78.1
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 4.8e-42 174.5 107 80.4
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 1.8e-41 172.6 104 81.7
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.4e-41 172.2 107 79.4
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.1e-41 171.8 107 78.5
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.1e-41 171.8 111 78.4
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 3.1e-41 171.8 107 79.4
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 5.3e-41 171.0 111 78.4
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 5.3e-41 171.0 104 80.8
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 5.3e-41 171.0 104 80.8
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 6.9e-41 170.6 106 78.3
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.2e-40 169.9 102 84.3
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 1.2e-40 169.9 104 79.8
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 1.2e-40 169.9 117 75.2
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.5e-40 169.5 106 77.4
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.5e-40 169.5 104 80.8
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.6e-40 168.7 107 77.6
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.4e-40 168.3 106 76.4
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 7.7e-40 167.2 107 79.4
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.7e-39 166.0 104 79.8
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.2e-39 165.6 105 77.1
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 6.5e-39 164.1 106 76.4
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 72.6
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 8.5e-39 163.7 104 78.8
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.1e-38 163.3 104 77.9
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.1e-38 163.3 107 75.7
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.4e-38 162.9 100 80.0
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.9e-38 162.5 103 78.6
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.9e-38 162.5 107 72.0
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 2.5e-38 162.2 109 72.5
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.2e-38 161.8 108 73.1
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.2e-38 161.8 104 76.9
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 3.2e-38 161.8 111 73.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 4.2e-38 161.4 111 73.0
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 4.2e-38 161.4 104 75.0
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 4.2e-38 161.4 104 76.9
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 4.2e-38 161.4 107 75.7
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 4.2e-38 161.4 107 74.8
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 5.5e-38 161.0 108 72.2
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 9.4e-38 160.2 111 72.1
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.2e-37 159.8 104 73.1
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.6e-37 159.5 104 77.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.1e-37 159.1 107 73.8
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 2.7e-37 158.7 108 71.3
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.7e-37 158.7 108 72.2
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.6e-37 158.3 104 76.0
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 3.6e-37 158.3 106 76.4
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 3.6e-37 158.3 107 74.8
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.6e-37 158.3 108 71.3
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 3.6e-37 158.3 106 73.6
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 3.6e-37 158.3 107 75.7
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 4.7e-37 157.9 108 70.4
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 4.7e-37 157.9 108 70.4
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 4.7e-37 157.9 108 70.4
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 4.7e-37 157.9 108 70.4
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 4.7e-37 157.9 108 70.4
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 4.7e-37 157.9 108 70.4
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 4.7e-37 157.9 103 75.7
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 4.7e-37 157.9 111 72.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 7.9e-37 157.1 103 73.8
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.0e-36 156.8 104 75.0
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.4e-36 156.4 108 70.4
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.4e-36 156.4 104 74.0
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.4e-36 156.4 114 71.1
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.0e-36 155.2 102 73.5
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 5.1e-36 154.5 108 72.2
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 5.1e-36 154.5 103 75.7
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 5.1e-36 154.5 109 73.4
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 8.8e-36 153.7 111 71.2
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.0e-35 152.5 108 72.2
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.3e-34 149.8 106 70.8
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.2e-34 149.1 85 88.2
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 4.8e-34 147.9 88 84.1
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.4e-33 146.4 84 85.7
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.4e-33 145.6 106 67.9
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 5.3e-33 144.4 131 59.5
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.0e-32 142.5 98 69.4
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 7.7e-32 140.6 104 68.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 3.8e-31 138.3 84 79.8
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 8.5e-31 137.1 84 79.8
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.5e-30 135.6 172 46.5
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.2e-30 134.8 93 76.3
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 5.5e-30 134.4 82 79.3
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 7.2e-30 134.0 98 68.4
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.1e-29 132.5 82 79.3
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 4.7e-29 131.3 84 75.0
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.0e-28 130.2 80 80.0
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.8e-28 129.4 82 76.8
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 1.8e-28 129.4 79 78.5
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.9e-28 128.3 84 75.0
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 2.0e-27 125.9 83 74.7
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 4.4e-27 124.8 83 75.9
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.3e-26 123.2 115 59.1
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.4e-25 119.8 76 78.9
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.5e-22 109.0 73 78.1
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.8e-20 102.8 85 58.8
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 8.8e-20 100.5 108 49.1
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 2.6e-19 99.0 58 87.9
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.8e-17 92.8 52 82.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.5e-16 88.6 52 78.8
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 3.8e-15 85.1 108 47.2
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 5.0e-15 84.7 60 70.0
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 5.0e-15 84.7 66 62.1
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.6e-13 79.7 58 72.4
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.6e-13 79.7 83 44.6
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 3.1e-09 65.5 108 37.0


User provided reference genes

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