Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 3.0e-207 724.9 368 100.0
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 8.7e-154 547.4 367 72.8
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.1e-153 547.0 361 74.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 5.6e-153 544.7 362 73.8
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 7.3e-153 544.3 367 72.5
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 9.9e-150 533.9 355 72.4
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.7e-149 533.1 361 71.5
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.2e-149 532.7 361 71.5
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 4.2e-148 528.5 356 72.8
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 7.1e-148 527.7 360 73.3
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.2e-147 526.9 367 71.1
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.6e-147 526.6 361 70.6
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 3.5e-147 525.4 361 71.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 6.6e-146 521.2 364 70.1
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.5e-145 519.2 389 66.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 3.3e-145 518.8 361 69.3
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.3e-144 516.9 359 70.8
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.6e-144 516.5 355 69.9
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 2.8e-144 515.8 359 70.5
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 4.8e-144 515.0 362 69.3
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 6.2e-144 514.6 370 68.6
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.1e-143 513.8 359 70.2
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.8e-143 513.1 362 68.8
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 2.4e-143 512.7 343 73.2
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 3.1e-143 512.3 359 70.2
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 4.0e-143 511.9 351 70.4
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 6.9e-143 511.1 353 70.8
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 7.6e-142 507.7 366 68.6
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 7.6e-142 507.7 360 70.0
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 3.8e-141 505.4 354 70.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.1e-140 503.8 354 70.1
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.4e-140 503.4 353 69.7
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.4e-140 503.4 356 67.4
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 4.2e-140 501.9 362 65.7
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 4.6e-139 498.4 355 69.3
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 4.6e-139 498.4 353 69.4
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 7.9e-139 497.7 356 69.1
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.0e-138 497.3 359 69.1
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.0e-138 497.3 359 69.1
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.0e-138 497.3 359 69.1
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.8e-138 496.5 355 69.0
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 2.3e-138 496.1 362 68.8
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 5.1e-138 495.0 354 66.9
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 5.1e-138 495.0 366 67.2
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 1.5e-137 493.4 357 68.1
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.5e-137 492.7 353 68.6
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 2.5e-137 492.7 361 67.6
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 2.5e-137 492.7 366 66.7
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 3.3e-137 492.3 366 66.9
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 9.6e-137 490.7 360 68.1
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 1.6e-136 490.0 358 66.5
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.7e-136 488.8 396 63.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 4.8e-136 488.4 317 74.1
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 6.2e-136 488.0 353 68.3
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.4e-135 486.9 354 67.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.8e-135 486.5 414 60.6
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 3.1e-135 485.7 356 68.3
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 4.0e-135 485.3 358 65.4
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 9.0e-135 484.2 354 66.1
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.2e-134 483.8 360 65.0
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 2.6e-134 482.6 327 73.7
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 5.8e-134 481.5 354 65.3
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.8e-133 478.8 356 66.6
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.1e-132 477.2 354 68.1
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.9e-132 476.5 355 65.9
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 2.4e-132 476.1 353 66.3
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 7.1e-132 474.6 362 63.3
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 6.0e-131 471.5 318 72.3
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 1.8e-130 469.9 318 73.0
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 8.7e-130 467.6 358 64.2
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.5e-129 466.1 362 65.2
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 9.3e-124 447.6 364 63.2
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.3e-122 443.7 354 61.0
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 8.7e-122 441.0 317 71.0
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 5.7e-121 438.3 365 60.3
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 7.4e-121 438.0 327 64.8
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 2.8e-120 436.0 360 58.3
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 3.7e-120 435.6 360 58.3
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.6e-118 429.5 285 75.1
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.8e-117 425.6 357 60.8
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.1e-95 354.4 354 53.4
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 4.1e-95 352.4 230 73.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.2e-94 350.9 352 48.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 7.7e-94 348.2 241 71.8
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.9e-92 343.6 354 52.0
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 8.0e-91 338.2 345 49.3
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 2.8e-88 329.7 335 49.0
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 5.7e-81 305.4 338 45.9
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 9.8e-73 278.1 216 64.8
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.1e-71 274.6 303 52.5
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.8e-66 257.3 179 69.3
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.6e-65 253.4 465 34.8
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 7.3e-60 235.3 179 64.8
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 6.2e-43 179.1 168 53.0
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.9e-40 170.2 142 60.6
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.9e-40 170.2 142 60.6
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 3.4e-33 146.7 268 34.7
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.5e-28 130.6 169 44.4
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 9.6e-20 102.1 93 53.8
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.2e-17 95.1 77 63.6
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 8.4e-16 89.0 92 43.5
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 8.4e-16 89.0 92 40.2
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 1.3e-13 81.6 54 75.9
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 4.9e-08 63.2 48 62.5


User provided reference genes

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