Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2544 Cannabis sativa HOM05D000431 ORTHO05D113943 3.2e-127 458.4 225 100.0
CANSAT21G1163 Cannabis sativa HOM05D000431 ORTHO05D000364 4.5e-20 102.4 256 36.7
PGR031G2087 Punica granatum HOM05D000431 ORTHO05D000364 2.5e-10 70.1 224 33.5
Actinidia25915 Actinidia chinensis HOM05D000431 ORTHO05D000364 3.6e-09 66.2 256 30.9
QL12p008578 Quercus lobata HOM05D000431 ORTHO05D000364 3.6e-09 66.2 261 31.8
Thecc.03G239000 Theobroma cacao HOM05D000431 ORTHO05D000364 1.0e-08 64.7 255 31.0
COL.COLO4_06686 Corchorus olitorius HOM05D000431 ORTHO05D000364 3.0e-08 63.2 259 30.5
Dinv25142 Davidia involucrata HOM05D000431 ORTHO05D000364 5.2e-08 62.4 260 31.2
Glyma.17G148800 Glycine max HOM05D000431 ORTHO05D000364 5.2e-08 62.4 253 30.0
VMungo0251G1141 Vigna mungo HOM05D000431 ORTHO05D000364 5.2e-08 62.4 255 31.0
CSS0031842 Camellia sinensis var. sinensis HOM05D000431 ORTHO05D000364 6.7e-08 62.0 252 29.4
CSS0038679 Camellia sinensis var. sinensis HOM05D000431 ORTHO05D000364 6.7e-08 62.0 252 29.4
arahy.Tifrunner.gnm1.ann1.46W8J9 Arachis hypogaea HOM05D000431 ORTHO05D000364 1.1e-07 61.2 253 30.4
arahy.Tifrunner.gnm1.ann1.FKJ1CZ Arachis hypogaea HOM05D000431 ORTHO05D000364 1.1e-07 61.2 253 30.4
Potri.003G084100 Populus trichocarpa HOM05D000431 ORTHO05D000364 1.1e-07 61.2 254 30.7
Lj4g0023711 Lotus japonicus HOM05D000431 ORTHO05D000364 1.5e-07 60.8 250 29.2
Ciclev10020980m.g Citrus clementina HOM05D000431 ORTHO05D000364 2.0e-07 60.5 256 30.5
Phvul.003G225800 Phaseolus vulgaris HOM05D000431 ORTHO05D000364 2.0e-07 60.5 257 30.7
CsaV3_3G002220 Cucumis sativus L. HOM05D000431 ORTHO05D000364 2.6e-07 60.1 258 29.8
Eucgr.D02135 Eucalyptus grandis HOM05D000431 ORTHO05D000364 2.6e-07 60.1 259 30.5
Glyma.05G066700 Glycine max HOM05D000431 ORTHO05D000364 3.3e-07 59.7 253 29.6
Manes.17G021500 Manihot esculenta HOM05D000431 ORTHO05D000364 3.3e-07 59.7 250 30.4
Medtr4g099240 Medicago truncatula HOM05D000431 ORTHO05D000364 5.7e-07 58.9 253 28.5
Cc08_g11200 Coffea canephora HOM05D000431 ORTHO05D000364 7.5e-07 58.5 251 29.9
Gohir.A08G162500 Gossypium hirsutum HOM05D000431 ORTHO05D000364 9.7e-07 58.2 256 30.5
Hma1.2p1_0570F.1_g180460 Hydrangea macrophylla HOM05D000431 ORTHO05D000364 9.7e-07 58.2 280 29.6
RcHm_v2.0_Chr7g0205831 Rosa chinensis HOM05D000431 ORTHO05D000364 9.7e-07 58.2 255 29.8
DCAR_008326 Daucus carota HOM05D000431 ORTHO05D000364 1.3e-06 57.8 265 28.3
Lalb_Chr16g0386411 Lupinus albus HOM05D000431 ORTHO05D000364 1.3e-06 57.8 262 30.2
Nitab4.5_0000506g0150 Nicotiana tabacum HOM05D000431 ORTHO05D000364 1.3e-06 57.8 259 30.1
MELO3C013893.2 Cucumis melo HOM05D000431 ORTHO05D000364 2.2e-06 57.0 258 28.7
Gorai.004G191500 Gossypium raimondii HOM05D000431 ORTHO05D000364 2.2e-06 57.0 256 30.1
Gohir.D08G182500 Gossypium hirsutum HOM05D000431 ORTHO05D000364 3.7e-06 56.2 256 29.7
Lj8C278G8 Lonicera japonica HOM05D000431 ORTHO05D000364 3.7e-06 56.2 249 30.5
Atru.chr9.1195 Acer truncatum HOM05D000431 ORTHO05D000364 4.8e-06 55.8 257 30.0
Ca_22020_v3 Cicer arietinum L. HOM05D000431 ORTHO05D000364 6.3e-06 55.5 207 30.4
Eucgr.E00345 Eucalyptus grandis HOM05D000431 ORTHO05D000364 6.3e-06 55.5 258 30.2
Lsat_1_v5_gn_3_15481 Lactuca sativa HOM05D000431 ORTHO05D000364 6.3e-06 55.5 261 27.6
CiPaw.11G072000 Carya illinoinensis HOM05D000431 ORTHO05D000364 8.2e-06 55.1 258 29.5
Dinv28882 Davidia involucrata HOM05D000431 ORTHO05D000364 8.2e-06 55.1 258 29.5


User provided reference genes

Program Settings