Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 4.4e-276 954.1 522 100.0
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 7.9e-177 624.4 495 69.3
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 2.1e-169 599.7 495 65.7
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.4e-168 597.0 495 66.9
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 2.3e-168 596.3 495 65.5
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.3e-167 592.4 495 65.3
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 3.4e-164 582.4 494 65.0
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 5.9e-164 581.6 491 65.4
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 5.0e-163 578.6 491 64.8
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 1.2e-161 573.9 494 65.8
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 6.1e-161 571.6 494 65.0
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.9e-160 568.9 494 64.2
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 1.1e-159 567.4 499 64.3
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-159 567.4 555 58.4
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.4e-159 565.5 555 58.2
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 9.7e-159 564.3 495 64.2
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.8e-158 562.0 556 58.1
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.5e-156 557.0 499 63.3
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 3.5e-156 555.8 493 64.9
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.9e-154 550.1 495 62.2
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 5.5e-154 548.5 494 63.0
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.2e-153 547.4 494 63.2
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 5.2e-152 542.0 496 62.3
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 5.7e-151 538.5 496 61.5
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 8.2e-150 534.6 519 60.1
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.0e-147 527.7 493 60.0
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 5.0e-147 525.4 495 60.8
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 5.0e-147 525.4 495 60.6
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 6.5e-147 525.0 503 60.8
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 7.2e-146 521.5 495 60.4
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 1.2e-145 520.8 432 66.9
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 4.4e-143 512.3 519 58.4
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 5.7e-143 511.9 496 59.3
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 7.5e-143 511.5 494 60.3
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 2.8e-142 509.6 495 59.2
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 9.1e-141 504.6 552 54.3
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 7.7e-140 501.5 575 52.7
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 1.7e-139 500.4 466 62.2
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 5.4e-133 478.8 440 60.2
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 7.7e-132 474.9 531 55.0
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.1e-129 466.8 504 54.8
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.8e-128 461.8 497 55.1
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 2.6e-127 459.9 498 55.6
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 2.8e-126 456.4 497 53.3
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 2.4e-125 453.4 497 53.1
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 5.4e-125 452.2 501 55.3
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 1.0e-123 448.0 495 54.1
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 2.3e-123 446.8 498 55.0
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 5.0e-123 445.7 433 59.4
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 4.3e-122 442.6 496 53.6
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 7.3e-122 441.8 501 51.7
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 7.3e-122 441.8 497 54.3
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 1.2e-121 441.0 495 53.9
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 2.1e-121 440.3 496 52.8
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 2.1e-121 440.3 498 54.0
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 3.6e-121 439.5 506 53.0
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 6.1e-121 438.7 499 53.7
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 6.1e-121 438.7 499 53.7
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 2.3e-120 436.8 499 53.7
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 4.0e-120 436.0 496 54.2
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 7.5e-119 431.8 498 54.8
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 1.3e-118 431.0 499 52.9
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 3.5e-116 422.9 496 52.6
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 5.6e-114 415.6 515 51.5
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.0e-107 394.8 421 56.1
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 1.7e-107 394.0 353 64.0
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 6.6e-107 392.1 456 53.7
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 8.9e-104 381.7 468 51.9
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 8.9e-104 381.7 472 51.9
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 4.4e-103 379.4 525 47.0
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 3.9e-99 366.3 501 48.9
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 7.6e-95 352.1 494 47.2
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.1e-93 348.2 496 47.0
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.1e-88 331.6 496 44.2
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.1e-85 321.6 417 51.3
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 1.2e-84 318.2 438 50.5
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 7.8e-84 315.5 372 54.6
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 1.1e-82 311.6 396 48.5
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 3.1e-80 303.5 256 62.9
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 2.6e-79 300.4 323 54.2
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 1.8e-51 208.0 319 43.9
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 1.7e-46 191.4 313 42.8
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 1.5e-39 168.3 242 45.5
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.8e-33 147.5 320 36.2
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.5e-31 140.6 159 47.8
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 2.6e-26 124.4 161 51.6
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 2.8e-25 120.9 546 29.7
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.4e-24 117.9 76 81.6
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 9.1e-24 115.9 79 78.5
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 8.5e-22 109.4 227 38.8
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 2.5e-21 107.8 71 83.1
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 6.8e-19 99.8 676 25.6
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 3.4e-18 97.4 53 94.3
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.0e-15 88.2 62 62.9
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 5.9e-15 86.7 62 66.1
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 7.7e-15 86.3 61 67.2
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 2.5e-13 81.3 287 32.4
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 3.3e-13 80.9 44 88.6
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.8e-11 75.1 54 68.5
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 2.6e-10 71.2 38 92.1
FvH4_5g29470 Fragaria vesca HOM05D007238 ORTHO05D009206 1.8e-08 65.1 60 55.0
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 2.4e-08 64.7 89 44.9
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 2.4e-08 64.7 89 44.9
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 1.3e-06 58.9 46 58.7
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 2.3e-06 58.2 61 52.5


User provided reference genes

Program Settings