Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 1.8e-254 882.1 453 100.0
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 2.4e-60 237.3 451 39.2
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 1.3e-58 231.5 466 37.8
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 1.9e-57 227.6 451 38.1
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 3.3e-54 216.9 475 38.1
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 6.4e-50 202.6 459 35.7
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 2.4e-49 200.7 475 35.6
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 3.3e-46 190.3 483 32.9
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 2.4e-44 184.1 456 35.5
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 3.1e-44 183.7 434 34.3
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 3.1e-44 183.7 450 32.4
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 3.8e-42 176.8 464 32.5
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 4.9e-42 176.4 451 35.0
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.1e-41 175.3 436 33.5
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 2.5e-41 174.1 441 33.8
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 3.2e-41 173.7 455 31.9
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 1.2e-40 171.8 457 32.8
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 2.1e-40 171.0 433 30.7
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.7e-40 170.6 434 32.9
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 2.3e-39 167.5 440 33.9
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.9e-39 166.8 430 33.0
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 1.3e-37 161.8 454 33.0
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 1.6e-37 161.4 469 33.9
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 9.0e-36 155.6 472 31.6
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 1.0e-34 152.1 451 32.2
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 1.3e-34 151.8 453 34.0
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 1.3e-34 151.8 436 31.2
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 1.3e-34 151.8 441 30.8
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 4.9e-34 149.8 443 32.7
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 4.9e-34 149.8 427 31.4
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 7.1e-33 146.0 449 32.5
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 7.1e-33 146.0 449 32.5
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 9.3e-33 145.6 453 32.7
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 2.1e-32 144.4 449 33.0
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 3.9e-31 140.2 360 34.2
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 8.7e-31 139.0 439 30.8
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 7.4e-30 136.0 453 31.1
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 2.8e-29 134.0 471 31.4
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 3.7e-29 133.7 464 30.8
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 4.8e-29 133.3 466 27.5
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 4.8e-29 133.3 478 30.8
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 5.3e-28 129.8 477 29.4
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 6.9e-28 129.4 346 32.9
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 2.6e-27 127.5 444 30.9
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 4.5e-27 126.7 438 31.5
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 1.7e-26 124.8 458 29.3
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 2.9e-26 124.0 463 30.7
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 2.9e-26 124.0 434 29.0
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 4.2e-25 120.2 319 31.0
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 2.7e-24 117.5 463 30.0
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 1.0e-23 115.5 428 27.8
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.0e-23 115.5 343 33.8
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 1.0e-23 115.5 490 27.6
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 1.4e-23 115.2 438 29.2
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 1.1e-22 112.1 456 30.9
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 2.0e-22 111.3 330 29.1
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 3.3e-22 110.5 457 30.9
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 1.7e-21 108.2 442 29.6
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 2.2e-21 107.8 444 27.9
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 2.2e-21 107.8 448 26.8
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 2.2e-21 107.8 470 29.6
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 2.8e-21 107.5 214 35.5
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 3.7e-21 107.1 448 28.6
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 6.3e-21 106.3 428 28.3
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 1.1e-20 105.5 476 27.5
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 9.1e-20 102.4 461 26.9
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 1.5e-19 101.7 453 27.2
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 2.0e-19 101.3 440 28.9
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 2.0e-19 101.3 343 29.7
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 1.0e-18 99.0 515 25.2
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 2.2e-18 97.8 342 29.2
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 2.9e-18 97.4 165 38.8
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 5.0e-18 96.7 453 27.6
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 5.0e-18 96.7 599 25.9
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 6.5e-18 96.3 468 28.4
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 3.2e-17 94.0 455 24.8
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.2e-17 94.0 331 29.6
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 4.2e-17 93.6 329 31.0
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 9.4e-17 92.4 520 26.2
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 1.6e-16 91.7 466 26.0
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 2.1e-16 91.3 457 24.7
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 2.1e-16 91.3 440 27.5
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 6.1e-16 89.7 493 27.4
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 7.9e-16 89.4 436 28.2
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.8e-15 88.2 508 28.1
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 2.3e-15 87.8 246 32.5
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 8.8e-15 85.9 325 27.1
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 1.1e-14 85.5 437 27.0
FvH4_5g19900 Fragaria vesca HOM05D007047 ORTHO05D009177 1.1e-14 85.5 190 38.4
FAN18G3895 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.1e-14 85.5 285 28.4
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 3.3e-14 84.0 491 25.1
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 7.4e-14 82.8 447 25.1
FAN18G3996 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.3e-13 82.0 137 41.6
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 3.5e-11 73.9 49 69.4
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 1.3e-10 72.0 352 27.0
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 1.7e-10 71.6 367 27.2
Psat2g156960 Pisum sativum HOM05D007047 ORTHO05D009177 2.2e-10 71.2 151 34.4
Psat0s1776g0120 Pisum sativum HOM05D007047 ORTHO05D009177 6.5e-10 69.7 151 35.8
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 3.2e-09 67.4 170 30.6
Cpa.g.sc89.13 Carica papaya HOM05D007047 ORTHO05D009177 7.2e-09 66.2 188 31.9
Sc07g0009150 Simmondsia chinensis HOM05D007047 ORTHO05D009177 7.2e-09 66.2 221 30.8
Zm00001eb428340 Zea mays HOM05D007047 ORTHO05D009177 1.0e-07 62.4 110 36.4
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 2.3e-07 61.2 339 26.0
Thhalv10027163m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 5.2e-07 60.1 50 54.0
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 5.2e-07 60.1 53 54.7
Ciclev10023353m.g Citrus clementina HOM05D007047 ORTHO05D009177 6.7e-07 59.7 163 33.1
Cpa.g.sc1463.1 Carica papaya HOM05D007047 ORTHO05D009177 2.0e-06 58.2 92 40.2


User provided reference genes

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