Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 8.9e-77 290.4 172 100.0
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 3.3e-39 165.6 173 66.5
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 3.3e-39 165.6 173 56.6
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.8e-36 154.8 167 62.9
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.0e-32 142.5 174 52.9
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 5.1e-32 141.7 169 53.8
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 6.7e-32 141.4 174 49.4
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 6.7e-32 141.4 171 62.6
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.1e-31 140.6 178 59.0
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 1.3e-30 137.1 174 53.4
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.6e-30 136.7 168 55.4
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 2.2e-30 136.3 184 48.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.2e-30 136.3 167 60.5
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.8e-30 136.0 172 52.9
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 2.8e-30 136.0 170 53.5
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 3.7e-30 135.6 175 60.6
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.8e-30 135.2 167 60.5
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 6.3e-30 134.8 167 50.3
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.3e-30 134.8 167 60.5
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 8.2e-30 134.4 174 47.7
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 8.2e-30 134.4 176 60.2
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 1.4e-29 133.7 166 51.8
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.4e-29 133.7 167 59.9
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.2e-28 130.6 177 45.8
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.5e-28 130.2 175 60.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.0e-28 129.8 177 60.5
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 2.0e-28 129.8 173 52.6
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 2.6e-28 129.4 169 50.9
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 3.4e-28 129.0 184 54.3
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.4e-28 129.0 171 52.6
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 4.5e-28 128.6 170 48.8
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 7.6e-28 127.9 165 60.6
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 7.6e-28 127.9 165 60.6
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 7.6e-28 127.9 172 52.9
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.7e-27 126.7 172 51.7
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.9e-27 125.9 165 59.4
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 3.8e-27 125.6 167 52.7
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 3.8e-27 125.6 171 60.2
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.8e-27 125.6 142 52.1
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 5.0e-27 125.2 167 52.7
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.0e-27 125.2 174 50.6
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 6.5e-27 124.8 164 57.9
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.1e-26 124.0 170 49.4
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 2.5e-26 122.9 175 47.4
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 2.1e-25 119.8 169 52.1
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 4.6e-25 118.6 173 42.8
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 7.9e-25 117.9 96 83.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 3.9e-24 115.5 173 43.4
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 6.7e-24 114.8 174 46.6
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 6.7e-24 114.8 174 46.6
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 6.7e-24 114.8 173 42.2
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 8.7e-24 114.4 170 42.4
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.1e-23 114.0 179 43.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.5e-23 113.6 172 43.6
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 2.5e-23 112.8 173 46.8
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 2.5e-23 112.8 177 57.6
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 3.3e-23 112.5 176 42.0
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 3.3e-23 112.5 177 45.8
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.3e-23 112.5 141 51.8
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 4.3e-23 112.1 94 63.8
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 7.4e-23 111.3 177 44.6
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 9.7e-23 110.9 173 42.8
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 1.3e-22 110.5 172 44.8
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.3e-22 110.5 176 44.3
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 2.8e-22 109.4 171 45.0
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 3.7e-22 109.0 170 42.9
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 3.7e-22 109.0 170 42.9
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 6.3e-22 108.2 175 44.0
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 8.2e-22 107.8 145 49.7
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 8.2e-22 107.8 176 44.9
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.4e-21 107.1 172 41.3
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.4e-21 107.1 172 41.3
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 1.8e-21 106.7 179 44.1
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 1.8e-21 106.7 144 60.4
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.8e-21 106.7 173 45.1
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.8e-21 106.7 153 45.1
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.8e-21 106.7 176 43.2
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.1e-21 105.9 171 40.9
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.1e-21 105.9 171 40.9
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 3.1e-21 105.9 171 40.9
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 3.1e-21 105.9 176 44.9
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 4.1e-21 105.5 170 42.4
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 6.9e-21 104.8 169 42.0
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 2.0e-20 103.2 145 45.5
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 2.6e-20 102.8 172 44.2
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 3.4e-20 102.4 63 79.4
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 5.9e-20 101.7 145 45.5
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 7.7e-20 101.3 172 44.2
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 7.7e-20 101.3 148 54.7
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.3e-19 100.5 250 38.8
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 6.5e-19 98.2 60 78.3
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 6.5e-19 98.2 60 78.3
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.1e-18 97.4 55 85.5
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 1.4e-18 97.1 141 47.5
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 2.5e-18 96.3 172 41.9
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 7.2e-18 94.7 191 38.7
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 9.4e-18 94.4 154 47.4
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 1.0e-16 90.9 60 75.0
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.4e-16 90.5 129 41.9
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 5.1e-16 88.6 142 45.8
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.1e-15 87.4 134 46.3
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 4.4e-15 85.5 63 69.8
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 7.4e-15 84.7 150 49.3
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 9.7e-15 84.3 63 65.1
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 3.7e-14 82.4 63 65.1
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 5.9e-12 75.1 63 57.1
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.3e-11 73.9 75 54.7
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 5.0e-11 72.0 64 59.4
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 3.2e-10 69.3 136 47.8
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 6.1e-09 65.1 87 46.0
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.0e-08 64.3 114 39.5
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 1.1e-07 60.8 66 48.5
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 2.2e-06 56.6 33 78.8
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.8e-06 56.2 33 75.8


User provided reference genes

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