Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 3.8e-196 688.0 344 100.0
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 4.8e-106 388.7 321 64.8
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 1.1e-105 387.5 342 60.8
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 3.1e-105 386.0 321 63.2
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 4.2e-102 375.6 343 60.1
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.3e-100 369.8 303 64.0
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 3.0e-100 369.4 312 61.9
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.9e-100 369.0 303 64.0
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.9e-100 369.0 303 64.0
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 3.9e-100 369.0 313 62.6
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 5.1e-100 368.6 342 58.2
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 1.5e-99 367.1 328 59.5
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 2.2e-98 363.2 294 65.0
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 2.2e-98 363.2 331 58.3
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.8e-98 362.1 294 64.6
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 8.2e-98 361.3 303 63.7
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 1.1e-97 360.9 345 57.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 1.1e-97 360.9 327 59.3
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 1.8e-97 360.1 318 60.4
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 3.1e-97 359.4 330 59.1
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 1.6e-96 357.1 349 55.3
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 2.6e-96 356.3 319 60.2
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 3.5e-96 355.9 331 58.9
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 4.5e-96 355.5 331 58.6
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 1.0e-95 354.4 340 57.1
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.3e-95 354.0 286 63.3
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.7e-95 353.6 300 61.0
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 8.5e-95 351.3 323 56.3
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 8.5e-95 351.3 336 57.1
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 8.5e-95 351.3 343 57.4
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-94 350.9 318 59.4
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.5e-94 350.5 314 60.8
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 1.5e-94 350.5 291 62.9
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 1.5e-94 350.5 315 59.0
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 3.2e-94 349.4 330 55.8
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.2e-94 349.4 332 58.4
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 5.5e-94 348.6 343 56.9
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 7.2e-94 348.2 327 56.9
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 9.4e-94 347.8 343 57.1
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 3.6e-93 345.9 319 56.7
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 1.4e-92 344.0 336 55.7
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 1.8e-92 343.6 317 58.7
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 4.0e-92 342.4 317 59.0
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 6.7e-92 341.7 321 54.8
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 5.7e-91 338.6 334 56.0
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 5.7e-91 338.6 314 55.7
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 9.7e-91 337.8 313 55.9
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 1.7e-90 337.0 317 57.4
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 2.8e-90 336.3 327 56.0
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 1.4e-89 334.0 339 56.6
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 1.4e-89 334.0 318 59.1
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.8e-89 333.6 320 57.8
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 2.4e-89 333.2 312 57.7
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 5.3e-89 332.0 320 55.6
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 5.3e-89 332.0 320 56.9
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 5.3e-89 332.0 333 57.1
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 5.3e-89 332.0 311 55.6
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 9.1e-89 331.3 332 54.2
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.2e-88 330.9 320 55.3
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 1.6e-88 330.5 307 58.6
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 1.6e-88 330.5 303 58.4
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 2.0e-88 330.1 317 59.0
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 2.7e-88 329.7 320 55.3
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 5.9e-88 328.6 329 53.5
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 7.7e-88 328.2 321 56.1
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.0e-87 327.8 320 55.3
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 1.3e-87 327.4 305 59.0
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 2.9e-87 326.2 332 56.0
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 6.5e-87 325.1 333 55.6
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 1.9e-86 323.6 315 54.9
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 1.9e-86 323.6 333 55.6
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 2.5e-86 323.2 320 55.6
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 5.5e-86 322.0 286 54.9
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 2.7e-85 319.7 313 53.4
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 6.1e-85 318.5 302 56.3
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 1.4e-84 317.4 306 57.2
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 5.2e-84 315.5 292 53.8
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 1.2e-83 314.3 312 54.8
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 1.5e-83 313.9 305 57.4
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 3.4e-83 312.8 311 53.7
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 6.3e-82 308.5 222 72.1
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 1.0e-79 301.2 362 47.8
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 2.9e-79 299.7 327 52.6
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 2.7e-77 293.1 316 53.8
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 3.0e-76 289.7 284 52.8
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 5.7e-75 285.4 327 50.5
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 1.7e-74 283.9 265 54.3
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 4.9e-74 282.3 222 64.9
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 3.1e-73 279.6 289 53.3
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 9.2e-73 278.1 199 72.4
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 3.5e-72 276.2 222 63.5
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 1.3e-71 274.2 299 46.8
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.9e-71 273.1 318 51.6
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 7.3e-70 268.5 343 46.1
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.4e-68 264.2 242 60.3
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 6.8e-68 261.9 212 67.5
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 4.6e-64 249.2 199 67.3
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 5.6e-62 242.3 328 40.9
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 1.7e-58 230.7 348 39.4
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 2.2e-58 230.3 310 46.5
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 9.2e-57 224.9 237 54.9
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.0e-56 223.8 298 39.6
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 8.1e-53 211.8 228 50.0
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 2.9e-50 203.4 216 52.8
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 7.3e-46 188.7 243 43.2
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 6.8e-44 182.2 166 54.8
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 2.6e-43 180.3 165 54.5
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-36 158.3 222 40.1
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 2.6e-35 153.7 201 42.8
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 7.1e-33 145.6 243 38.3
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 9.3e-33 145.2 259 34.0
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 1.7e-31 141.0 136 59.6
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 2.3e-31 140.6 89 70.8
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 6.6e-31 139.0 235 41.3
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 1.3e-29 134.8 136 44.1
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 5.8e-27 125.9 165 46.1
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 1.3e-21 108.2 73 68.5
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 1.8e-20 104.4 136 42.6
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 1.5e-19 101.3 92 63.0
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 2.9e-18 97.1 98 41.8
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 7.1e-17 92.4 45 91.1
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 3.5e-16 90.1 76 72.4
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 2.3e-15 87.4 114 43.0
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 4.3e-14 83.2 64 64.1
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 7.4e-14 82.4 199 29.1
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 1.9e-09 67.8 50 52.0
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-08 65.1 81 39.5


User provided reference genes

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