Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 1.2e-76 289.7 139 100.0
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 1.1e-56 223.4 109 100.0
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 1.9e-45 186.0 129 67.4
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 6.2e-44 181.0 132 67.4
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 6.8e-43 177.6 134 67.9
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 8.9e-43 177.2 137 66.4
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 3.4e-42 175.3 137 65.7
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 7.5e-42 174.1 142 63.4
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 7.5e-42 174.1 142 63.4
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 2.9e-41 172.2 138 62.3
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 6.4e-41 171.0 137 64.2
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 6.4e-41 171.0 139 60.4
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 1.9e-40 169.5 138 60.9
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 5.4e-40 167.9 132 62.1
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 1.2e-39 166.8 137 62.0
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 1.6e-39 166.4 116 66.4
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 4.6e-39 164.9 127 62.2
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 6.0e-39 164.5 136 60.3
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 6.0e-39 164.5 136 60.3
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 1.0e-38 163.7 137 60.6
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 1.3e-38 163.3 137 57.7
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 2.3e-38 162.5 139 61.9
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 6.6e-38 161.0 124 66.1
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 1.1e-37 160.2 134 59.7
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 1.1e-37 160.2 139 61.9
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 1.9e-37 159.5 141 58.2
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.5e-37 159.1 136 58.8
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 2.5e-37 159.1 129 63.6
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 3.3e-37 158.7 139 60.4
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 4.3e-37 158.3 138 61.6
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 5.6e-37 157.9 127 62.2
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 5.6e-37 157.9 134 58.2
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 7.3e-37 157.5 132 60.6
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 9.5e-37 157.1 132 61.4
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 1.6e-36 156.4 137 57.7
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 2.1e-36 156.0 150 56.0
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 3.6e-36 155.2 131 61.1
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 1.8e-35 152.9 133 56.4
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.3e-35 152.5 129 59.7
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 3.1e-35 152.1 133 55.6
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 3.1e-35 152.1 131 56.5
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 4.0e-35 151.8 133 56.4
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 4.0e-35 151.8 133 56.4
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 4.0e-35 151.8 95 72.6
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 5.2e-35 151.4 135 55.6
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 6.8e-35 151.0 131 58.0
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 6.8e-35 151.0 133 54.9
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 6.8e-35 151.0 135 54.8
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 6.8e-35 151.0 141 56.7
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 8.9e-35 150.6 131 58.0
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 8.9e-35 150.6 137 55.5
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.2e-34 150.2 130 60.8
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 4.4e-34 148.3 133 54.9
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 5.8e-34 147.9 145 55.9
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 7.5e-34 147.5 136 59.6
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 9.8e-34 147.1 133 54.1
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 2.2e-33 146.0 136 59.6
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 2.9e-33 145.6 133 53.4
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 4.9e-33 144.8 138 59.4
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 4.9e-33 144.8 116 62.1
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 6.4e-33 144.4 137 55.5
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 6.4e-33 144.4 134 59.7
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 8.3e-33 144.1 133 59.4
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 8.3e-33 144.1 139 55.4
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 1.9e-32 142.9 133 58.6
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 4.1e-32 141.7 142 57.7
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.1e-32 141.0 135 57.0
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 7.1e-32 141.0 118 61.9
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 9.2e-32 140.6 137 56.2
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.6e-31 139.8 131 53.4
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.6e-31 139.8 125 59.2
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 2.7e-31 139.0 136 58.1
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 3.5e-31 138.7 133 54.9
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 3.5e-31 138.7 139 54.7
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 4.6e-31 138.3 139 54.7
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 6.0e-31 137.9 126 56.3
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 6.0e-31 137.9 126 56.3
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 6.0e-31 137.9 142 56.3
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 7.8e-31 137.5 139 54.7
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 7.8e-31 137.5 141 53.9
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 1.3e-30 136.7 117 59.8
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.3e-30 136.7 125 56.0
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 2.3e-30 136.0 127 58.3
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 3.0e-30 135.6 137 54.0
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 3.0e-30 135.6 121 58.7
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 6.6e-30 134.4 129 54.3
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 8.6e-30 134.0 139 56.1
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 1.1e-29 133.7 131 55.0
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 3.3e-29 132.1 105 67.6
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 3.3e-29 132.1 123 57.7
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 3.3e-29 132.1 139 55.4
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 5.6e-29 131.3 115 59.1
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 7.3e-29 131.0 131 55.0
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 1.2e-28 130.2 140 53.6
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.6e-28 129.8 117 59.0
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 1.6e-28 129.8 126 57.9
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 1.6e-28 129.8 143 53.1
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 3.6e-28 128.6 189 42.3
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 1.8e-27 126.3 129 54.3
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 3.1e-27 125.6 136 51.5
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 3.1e-27 125.6 138 51.4
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 3.1e-27 125.6 138 50.7
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.5e-26 123.2 132 50.8
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 2.6e-26 122.5 112 58.0
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 2.6e-26 122.5 112 58.0
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 4.4e-26 121.7 139 51.8
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 5.8e-26 121.3 132 53.0
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 1.3e-25 120.2 135 50.4
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 1.7e-25 119.8 136 54.4
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 2.2e-25 119.4 113 56.6
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 3.7e-25 118.6 109 58.7
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 3.7e-25 118.6 136 50.0
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 6.4e-25 117.9 127 52.0
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 1.9e-24 116.3 130 52.3
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.4e-24 115.9 154 46.1
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.2e-24 115.5 133 48.9
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 4.1e-24 115.2 132 48.5
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 7.1e-24 114.4 136 51.5
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 2.7e-23 112.5 96 61.5
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 1.0e-22 110.5 105 53.3
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.0e-22 110.5 114 50.9
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 2.3e-22 109.4 65 80.0
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 3.0e-22 109.0 111 55.0
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.5e-21 106.7 170 39.4
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 2.5e-21 105.9 80 61.2
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 3.3e-21 105.5 52 86.5
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 7.3e-21 104.4 61 72.1
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 2.1e-20 102.8 57 77.2
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 8.1e-20 100.9 60 71.7
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.4e-19 100.1 130 46.2
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 2.4e-16 89.4 64 62.5
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 4.2e-16 88.6 112 51.8
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 1.6e-15 86.7 40 90.0
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 7.8e-15 84.3 90 46.7
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.0e-14 84.0 106 44.3
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 1.3e-14 83.6 119 37.8
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 2.3e-14 82.8 105 47.6
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 1.5e-13 80.1 50 64.0
vmacro01351 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 1.5e-13 80.1 87 51.7
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 3.3e-13 79.0 121 42.1
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 7.3e-13 77.8 107 45.8
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 1.3e-12 77.0 95 47.4
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.8e-12 75.9 145 39.3
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.8e-11 73.2 102 46.1
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 1.2e-10 70.5 49 61.2
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 4.9e-09 65.1 40 72.5
COL.COLO4_27990 Corchorus olitorius HOM05D004542 ORTHO05D005380 8.4e-09 64.3 84 46.4
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 3.2e-08 62.4 86 50.0
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 9.3e-08 60.8 61 52.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 7.9e-07 57.8 37 67.6


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