Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 7.6e-172 607.1 305 100.0
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 3.3e-143 511.9 298 83.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 5.7e-143 511.1 302 82.5
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 3.7e-142 508.4 298 82.2
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 6.3e-142 507.7 302 81.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.1e-141 506.9 302 80.5
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 9.1e-141 503.8 298 82.9
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.6e-140 503.1 298 82.6
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.6e-140 503.1 304 80.3
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.6e-140 503.1 298 82.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.0e-140 502.7 305 80.7
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.6e-140 502.3 298 82.6
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.9e-140 501.1 302 80.8
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.3e-139 500.0 298 81.9
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.8e-139 498.4 298 81.5
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 6.5e-139 497.7 298 80.2
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.4e-138 493.8 302 79.5
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-137 492.7 300 79.7
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.1e-137 492.7 302 79.5
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.7e-137 492.3 302 79.8
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.7e-137 492.3 305 77.7
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 8.0e-137 490.7 298 80.9
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 2.3e-136 489.2 302 79.8
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 2.3e-136 489.2 298 80.9
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 3.0e-136 488.8 302 80.1
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.0e-136 488.4 302 77.2
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 6.7e-136 487.6 302 77.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.5e-135 486.5 302 79.1
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 2.0e-135 486.1 298 80.5
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.0e-135 486.1 298 80.2
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.3e-135 485.3 302 78.5
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 3.3e-135 485.3 298 80.5
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.7e-134 483.0 297 77.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.7e-134 481.9 302 76.2
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 8.2e-134 480.7 302 75.8
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.1e-133 480.3 302 75.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.1e-133 478.8 302 76.5
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 7.0e-133 477.6 305 76.4
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 9.1e-133 477.2 297 78.5
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 9.1e-133 477.2 297 78.5
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.2e-132 476.9 302 75.2
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.6e-132 476.5 302 75.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 4.5e-132 474.9 302 76.8
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 7.7e-132 474.2 305 75.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.0e-131 473.8 302 75.5
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.0e-131 473.8 302 75.5
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.3e-131 473.4 302 75.8
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.2e-131 472.6 300 76.0
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.2e-131 472.6 300 76.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.9e-131 472.2 300 76.0
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.9e-131 472.2 298 77.9
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 6.5e-131 471.1 307 73.9
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 6.5e-131 471.1 302 75.8
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 6.5e-131 471.1 300 75.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 8.5e-131 470.7 298 77.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.1e-130 470.3 300 75.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.1e-130 470.3 302 75.5
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.5e-130 469.9 302 75.5
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.5e-130 469.9 302 75.5
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.9e-130 469.5 305 75.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.9e-130 469.5 299 77.6
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 3.2e-130 468.8 302 75.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 4.2e-130 468.4 300 75.0
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 5.5e-130 468.0 300 74.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 9.4e-130 467.2 302 75.2
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 9.4e-130 467.2 302 75.2
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.1e-129 466.1 300 74.3
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 8.0e-129 464.2 307 73.9
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 8.0e-129 464.2 302 74.8
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.4e-128 463.4 307 74.9
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 5.2e-128 461.5 302 74.5
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.2e-127 460.3 307 74.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.5e-127 459.9 302 74.2
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.6e-127 459.1 305 74.4
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 3.4e-127 458.8 278 82.7
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 9.8e-127 457.2 307 73.9
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 9.8e-127 457.2 307 73.9
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 3.7e-126 455.3 298 74.5
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.4e-125 453.4 299 73.2
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 7.0e-125 451.1 307 72.6
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.7e-123 446.4 299 72.6
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.4e-117 426.8 281 76.5
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.7e-115 419.9 304 68.4
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.6e-115 417.9 301 66.4
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 6.8e-112 407.9 305 66.6
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.6e-111 406.0 304 66.8
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.7e-110 403.3 245 81.6
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.2e-110 402.9 260 76.5
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 8.3e-110 401.0 302 66.2
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.7e-108 396.0 307 65.5
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.9e-106 389.8 266 71.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.3e-102 377.1 281 66.5
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 4.3e-98 362.1 242 71.5
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.6e-97 359.0 303 60.1
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.2e-89 334.0 293 59.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.8e-89 332.8 228 71.1
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 8.1e-89 331.3 287 59.2
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.4e-87 325.9 269 63.6
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 3.8e-86 322.4 220 73.2
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.4e-85 319.7 306 54.2
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 7.1e-85 318.2 262 63.7
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 2.7e-84 316.2 299 54.5
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.8e-81 306.2 194 77.3
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.0e-80 302.4 305 54.8
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.3e-75 287.3 302 49.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 5.3e-72 275.4 202 68.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 4.8e-65 252.3 317 42.6
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.0e-64 249.2 214 59.8
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.2e-54 216.9 143 76.2
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 4.9e-54 215.7 301 44.9
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.4e-54 214.9 144 76.4
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.5e-53 212.2 144 75.0
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.6e-49 200.7 313 39.6
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-46 190.7 144 70.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 3.9e-43 179.5 162 51.2
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.7e-41 172.9 115 73.0
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.6e-39 166.8 370 31.4
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 4.2e-37 159.5 266 41.4
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.1e-35 152.5 89 77.5
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 9.7e-34 148.3 316 33.5
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.6e-28 131.0 80 76.2
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.0e-27 126.7 341 30.5
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.9e-13 80.9 43 86.0


User provided reference genes

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