Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 0.0e+00 1246.1 663 100.0
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 5.2e-173 612.1 726 53.9
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 8.5e-168 594.7 721 53.3
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 3.1e-162 576.2 712 54.1
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-160 570.9 712 52.9
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 3.8e-160 569.3 725 51.9
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 2.0e-156 557.0 740 48.0
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.7e-155 553.9 721 49.9
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.1e-154 551.2 724 51.1
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.5e-151 540.0 735 49.3
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.1e-150 537.0 725 50.2
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.0e-149 534.6 736 47.7
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.9e-147 525.8 713 50.2
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 9.2e-146 521.5 742 49.9
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.2e-145 521.2 733 48.6
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 3.5e-145 519.6 743 48.6
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.9e-145 518.8 712 50.6
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-144 517.7 712 51.1
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.7e-144 517.3 716 50.6
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.3e-144 516.9 724 47.7
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 3.8e-144 516.2 681 51.0
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.8e-144 516.2 723 48.5
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.8e-144 516.2 732 49.2
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.1e-143 514.6 736 48.8
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.9e-143 513.8 723 47.9
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 3.3e-143 513.1 704 48.2
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 2.1e-142 510.4 710 47.7
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 4.7e-142 509.2 676 48.1
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.0e-141 506.5 725 47.7
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 4.0e-141 506.1 727 46.6
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 4.0e-141 506.1 723 46.6
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 3.4e-140 503.1 718 46.8
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 2.2e-139 500.4 729 46.6
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.4e-138 497.7 737 47.8
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 9.2e-138 495.0 723 45.5
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 3.0e-136 490.0 740 48.0
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.0e-136 490.0 717 47.8
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 6.6e-136 488.8 714 45.4
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 6.6e-136 488.8 755 45.3
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-135 488.0 566 55.8
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.9e-135 487.3 780 45.4
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.9e-135 487.3 665 48.4
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.5e-135 486.9 703 47.8
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 5.6e-135 485.7 730 46.2
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 9.5e-135 485.0 731 46.1
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 2.1e-134 483.8 619 51.4
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 2.8e-134 483.4 724 47.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 8.0e-134 481.9 726 45.7
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.3e-131 474.6 720 43.9
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 8.3e-131 471.9 751 47.0
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 8.3e-131 471.9 746 45.6
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 4.1e-130 469.5 725 45.0
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.0e-129 465.7 700 44.3
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 6.0e-129 465.7 732 45.5
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.3e-128 463.8 702 44.7
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.8e-126 456.8 851 42.5
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 4.7e-126 456.1 663 45.1
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 3.1e-125 453.4 687 45.9
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 7.5e-124 448.7 725 43.0
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 9.9e-124 448.4 709 43.0
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.7e-123 447.6 571 53.6
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.7e-123 447.6 800 42.2
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.2e-123 447.2 626 50.8
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 8.3e-123 445.3 729 46.4
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.3e-120 437.2 724 43.9
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 8.6e-120 435.3 729 45.1
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 2.5e-119 433.7 718 44.0
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.2e-118 429.1 782 41.8
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 6.8e-117 425.6 724 44.9
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 9.9e-116 421.8 734 42.5
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 2.9e-115 420.2 719 43.3
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.1e-114 418.3 718 43.2
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.7e-113 413.7 750 43.5
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 4.6e-113 412.9 720 43.3
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 1.4e-109 401.4 695 42.2
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 2.4e-109 400.6 719 40.9
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.3e-107 394.8 737 39.3
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 8.4e-107 392.1 746 38.7
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.1e-106 391.7 548 48.5
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.4e-106 391.3 716 42.2
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 5.4e-106 389.4 737 38.9
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 4.6e-105 386.3 649 43.3
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 6.0e-105 386.0 727 38.7
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.3e-104 384.0 789 38.1
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 2.3e-104 384.0 575 44.5
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.5e-103 381.3 718 41.2
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 3.3e-103 380.2 730 37.7
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 2.1e-102 377.5 719 39.8
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.8e-102 377.1 648 42.1
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.4e-101 374.0 751 38.5
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.2e-100 371.7 567 45.0
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 2.0e-100 370.9 712 41.9
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.4e-100 370.2 653 40.4
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 6.4e-99 365.9 686 40.7
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.4e-99 365.9 723 38.5
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 6.4e-99 365.9 704 39.6
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.4e-99 365.5 728 36.8
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-98 365.2 695 43.3
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 2.4e-98 364.0 659 40.2
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 2.4e-98 364.0 710 39.0
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 5.4e-98 362.8 710 38.9
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 2.1e-97 360.9 655 41.4
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 3.5e-97 360.1 627 42.3
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 7.9e-97 359.0 668 40.3
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.8e-96 357.8 666 41.0
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.5e-95 354.8 641 42.0
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.9e-95 354.4 755 39.2
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 3.3e-95 353.6 627 41.9
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 3.7e-94 350.1 663 41.2
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.8e-94 349.7 642 40.7
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.1e-93 347.1 726 36.9
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.8e-92 342.8 538 43.7
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 1.7e-91 341.3 688 39.5
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 3.8e-91 340.1 774 34.6
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 8.4e-91 339.0 671 39.5
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 8.4e-91 339.0 654 40.5
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 1.1e-90 338.6 661 39.9
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 2.4e-90 337.4 697 36.6
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 5.5e-90 336.3 662 38.5
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.2e-89 335.1 616 42.0
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.6e-89 334.7 659 39.0
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 7.9e-89 332.4 631 41.0
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 2.3e-88 330.9 721 37.7
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 5.1e-88 329.7 815 33.6
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 5.1e-88 329.7 661 39.5
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 5.6e-87 326.2 306 58.5
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 7.4e-87 325.9 662 39.3
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 2.1e-86 324.3 661 39.3
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.0e-85 318.9 354 57.1
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 5.8e-84 316.2 718 36.2
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 1.3e-83 315.1 627 39.9
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.7e-83 314.7 668 36.4
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.9e-82 311.2 801 33.0
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.1e-81 307.8 641 39.2
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.7e-81 307.4 608 37.7
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.3e-80 304.3 633 39.2
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.9e-77 292.7 311 56.3
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-76 291.6 373 47.7
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.7e-73 280.8 204 69.6
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 6.1e-73 279.6 640 34.8
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.1e-71 275.4 666 34.8
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.4e-71 272.7 304 52.6
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 2.8e-70 270.8 415 41.4
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.0e-67 262.3 344 48.0
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 3.2e-66 257.3 556 37.1
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 6.1e-65 253.1 528 35.6
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.3e-62 245.4 209 60.3
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 8.0e-57 226.1 283 47.0
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 4.4e-55 220.3 617 33.7
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 7.4e-55 219.5 215 52.6
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.1e-53 215.7 244 50.4
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 6.1e-49 199.9 487 33.3
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.7e-44 183.0 142 70.4
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 6.5e-43 179.9 488 36.9
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.4e-37 162.2 204 45.6
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 7.7e-36 156.4 162 53.1
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.9e-34 151.8 170 55.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 7.5e-31 139.8 241 41.1
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 6.3e-30 136.7 441 33.8
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.4e-29 135.6 125 58.4
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 4.1e-29 134.0 207 44.0
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.1e-26 125.9 375 34.1
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.5e-26 125.6 304 33.6
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.6e-25 122.1 98 65.3
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.2e-23 115.9 145 55.9
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.6e-23 114.8 362 30.1
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.2e-21 107.8 356 33.4
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.6e-12 79.0 99 48.5
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.3e-11 75.1 85 54.1
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.9e-10 72.0 60 56.7
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.3e-10 70.1 67 55.2
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.7e-09 67.4 106 42.5
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 8.1e-09 66.6 443 26.4
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.3e-08 65.1 58 55.2


User provided reference genes

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