Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.5e-53 211.8 105 100.0
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.1e-36 155.6 96 76.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 3.6e-36 154.8 113 69.0
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.0e-35 153.3 91 82.4
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 1.4e-35 152.9 93 79.6
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.8e-35 152.5 102 71.6
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 2.3e-35 152.1 99 74.7
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.0e-35 151.8 108 68.5
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 3.0e-35 151.8 95 75.8
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 3.9e-35 151.4 104 70.2
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 5.1e-35 151.0 96 71.9
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 8.8e-35 150.2 110 65.5
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 8.8e-35 150.2 95 73.7
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 1.1e-34 149.8 104 72.1
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 1.1e-34 149.8 106 70.8
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.5e-34 149.4 96 72.9
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.5e-34 149.4 91 79.1
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.5e-34 149.4 91 74.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 2.0e-34 149.1 93 72.0
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 2.6e-34 148.7 105 66.7
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.6e-34 148.7 87 78.2
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 3.3e-34 148.3 93 72.0
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 5.7e-34 147.5 90 73.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 5.7e-34 147.5 97 72.2
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 5.7e-34 147.5 94 72.3
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 7.4e-34 147.1 110 66.4
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 7.4e-34 147.1 110 64.5
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 7.4e-34 147.1 90 75.6
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 9.7e-34 146.7 110 68.2
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.7e-33 146.0 90 76.7
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.7e-33 146.0 91 76.9
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 1.7e-33 146.0 90 75.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.7e-33 146.0 95 71.6
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 2.2e-33 145.6 90 72.2
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 2.8e-33 145.2 90 72.2
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.8e-33 145.2 95 71.6
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 3.7e-33 144.8 94 71.3
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 4.8e-33 144.4 95 69.5
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 4.8e-33 144.4 88 73.9
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 4.8e-33 144.4 95 69.5
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 4.8e-33 144.4 110 62.7
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 4.8e-33 144.4 96 70.8
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 6.3e-33 144.1 98 70.4
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 6.3e-33 144.1 108 64.8
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.1e-32 143.3 87 73.6
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.1e-32 143.3 90 74.4
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.1e-32 143.3 87 74.7
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.4e-32 142.9 108 64.8
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.8e-32 142.5 93 69.9
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.8e-32 142.5 93 69.9
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.8e-32 142.5 93 69.9
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.8e-32 142.5 94 70.2
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.8e-32 142.5 94 70.2
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 2.4e-32 142.1 103 62.1
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.4e-32 142.1 108 63.9
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 2.4e-32 142.1 92 68.5
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.4e-32 142.1 76 84.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 3.1e-32 141.7 93 68.8
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 3.1e-32 141.7 93 69.9
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 3.1e-32 141.7 93 69.9
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.1e-32 141.7 111 64.0
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.1e-32 141.7 111 64.0
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 3.1e-32 141.7 104 67.3
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 4.1e-32 141.4 87 73.6
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 4.1e-32 141.4 87 73.6
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 4.1e-32 141.4 87 73.6
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 4.1e-32 141.4 85 75.3
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 4.1e-32 141.4 85 75.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 4.1e-32 141.4 92 68.5
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 4.1e-32 141.4 104 61.5
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 4.1e-32 141.4 105 65.7
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 5.3e-32 141.0 95 69.5
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 7.0e-32 140.6 88 70.5
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 9.1e-32 140.2 105 63.8
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 9.1e-32 140.2 104 62.5
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.2e-31 139.8 94 70.2
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.6e-31 139.4 102 66.7
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 1.6e-31 139.4 99 65.7
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.6e-31 138.7 94 69.1
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 3.5e-31 138.3 87 71.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.3e-30 136.3 111 62.2
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.1e-29 133.3 112 62.5
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 4.2e-29 131.3 73 80.8
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 5.5e-29 131.0 76 77.6
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 5.5e-29 131.0 95 62.1
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 1.6e-28 129.4 93 65.6
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.7e-28 128.6 77 81.8
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 6.1e-28 127.5 77 77.9
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 8.0e-28 127.1 76 75.0
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.0e-27 126.7 91 62.6
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 2.3e-27 125.6 88 68.2
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 2.6e-26 122.1 77 71.4
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 3.3e-26 121.7 91 62.6
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 4.4e-26 121.3 70 84.3
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.4e-26 121.3 96 62.5
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 4.4e-26 121.3 92 65.2
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.3e-25 119.8 90 62.2
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 2.8e-25 118.6 95 65.3
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.8e-24 115.9 76 71.1
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 6.5e-22 107.5 110 47.3
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.0e-19 100.1 95 51.6
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.3e-19 99.0 104 46.2
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 2.8e-17 92.0 94 45.7
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 5.4e-16 87.8 77 55.8
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 2.0e-15 85.9 55 72.7
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.9e-13 79.3 110 37.3
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 3.7e-09 65.1 90 40.0


User provided reference genes

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