Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2027 Cannabis sativa HOM05D005270 ORTHO05D006239 1.7e-224 782.3 399 100.0
Prupe.5G075500 Prunus persica HOM05D005270 ORTHO05D006239 2.7e-185 652.1 399 84.0
Gohir.A03G010000 Gossypium hirsutum HOM05D005270 ORTHO05D006239 6.0e-185 651.0 399 82.5
Ciclev10020501m.g Citrus clementina HOM05D005270 ORTHO05D006239 5.1e-184 647.9 399 82.0
RcHm_v2.0_Chr7g0202331 Rosa chinensis HOM05D005270 ORTHO05D006239 5.1e-184 647.9 399 82.0
Gohir.D03G160700 Gossypium hirsutum HOM05D005270 ORTHO05D006239 1.5e-183 646.4 399 82.0
QL12p013868 Quercus lobata HOM05D005270 ORTHO05D006239 1.5e-183 646.4 399 83.0
Manes.01G076600 Manihot esculenta HOM05D005270 ORTHO05D006239 1.9e-183 646.0 400 83.2
CiPaw.11G150400 Carya illinoinensis HOM05D005270 ORTHO05D006239 7.4e-183 644.0 399 82.7
MD06G1067000 Malus domestica HOM05D005270 ORTHO05D006239 9.6e-183 643.7 399 82.2
Atru.chr9.1379_Atru.chr9.1380 Acer truncatum HOM05D005270 ORTHO05D006239 8.1e-182 640.6 402 81.6
Duzib068G0557 Durio zibethinus HOM05D005270 ORTHO05D006239 1.1e-181 640.2 399 81.5
ClCG01G003850 Citrullus lanatus HOM05D005270 ORTHO05D006239 6.9e-181 637.5 404 80.2
Gohir.D09G190100 Gossypium hirsutum HOM05D005270 ORTHO05D006239 6.9e-181 637.5 399 81.0
Gorai.006G212700 Gossypium raimondii HOM05D005270 ORTHO05D006239 6.9e-181 637.5 399 81.0
Gohir.A09G195500 Gossypium hirsutum HOM05D005270 ORTHO05D006239 1.2e-180 636.7 399 81.0
Thecc.03G257000 Theobroma cacao HOM05D005270 ORTHO05D006239 3.4e-180 635.2 403 81.1
FvH4_5g00280 Fragaria vesca HOM05D005270 ORTHO05D006239 4.5e-180 634.8 400 80.5
FAN08G1405 Fragaria x ananassa HOM05D005270 ORTHO05D006239 4.5e-180 634.8 400 80.5
FAN18G1040 Fragaria x ananassa HOM05D005270 ORTHO05D006239 2.2e-179 632.5 400 80.5
PGR031G3926 Punica granatum HOM05D005270 ORTHO05D006239 3.8e-179 631.7 404 80.0
MELO3C005559.2 Cucumis melo HOM05D005270 ORTHO05D006239 4.2e-178 628.2 407 77.9
FAN13G2928 Fragaria x ananassa HOM05D005270 ORTHO05D006239 4.2e-178 628.2 406 79.6
Eucgr.D02030 Eucalyptus grandis HOM05D005270 ORTHO05D006239 7.1e-178 627.5 410 79.8
FAN04G3018 Fragaria x ananassa HOM05D005270 ORTHO05D006239 7.1e-178 627.5 405 79.5
Sed0019529 Sechium edule HOM05D005270 ORTHO05D006239 9.3e-178 627.1 404 79.7
Actinidia27450 Actinidia chinensis HOM05D005270 ORTHO05D006239 3.5e-177 625.2 400 78.2
Hma1.2p1_1414F.1_g281890 Hydrangea macrophylla HOM05D005270 ORTHO05D006239 3.5e-177 625.2 400 78.8
CsaV3_5G003980 Cucumis sativus L. HOM05D005270 ORTHO05D006239 3.0e-176 622.1 407 76.9
Potri.001G120400 Populus trichocarpa HOM05D005270 ORTHO05D006239 3.0e-176 622.1 405 79.5
Sabra01G0092800 Salix brachista HOM05D005270 ORTHO05D006239 3.3e-175 618.6 405 79.5
Lj2A211T58 Lonicera japonica HOM05D005270 ORTHO05D006239 5.7e-175 617.8 401 77.8
TWI81G0718 Tripterygium wilfordii HOM05D005270 ORTHO05D006239 5.7e-175 617.8 400 80.0
Actinidia05188 Actinidia chinensis HOM05D005270 ORTHO05D006239 1.3e-174 616.7 400 77.0
CSS0023019 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 2.1e-174 615.9 400 78.8
CSS0046114 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 2.1e-174 615.9 400 78.8
GSVIVG01004774001 Vitis vinifera HOM05D005270 ORTHO05D006239 2.8e-174 615.5 399 78.7
Dinv21601 Davidia involucrata HOM05D005270 ORTHO05D006239 4.8e-174 614.8 400 77.0
GSVIVG01001274001 Vitis vinifera HOM05D005270 ORTHO05D006239 3.1e-173 612.1 399 78.4
Glyma.05G056400 Glycine max HOM05D005270 ORTHO05D006239 2.5e-170 602.4 403 76.7
arahy.Tifrunner.gnm1.ann1.9F7ELE Arachis hypogaea HOM05D005270 ORTHO05D006239 7.1e-170 600.9 405 77.3
Dinv39103 Davidia involucrata HOM05D000201 ORTHO05D001515 7.1e-170 600.9 388 77.8
Solyc08g079070.2 Solanum lycopersicum HOM05D005270 ORTHO05D006239 9.3e-170 600.5 400 75.2
CAN.G1217.18 Capsicum annuum HOM05D000486 ORTHO05D000375 1.2e-169 600.1 398 75.1
Sopen08g027530 Solanum pennellii HOM05D005270 ORTHO05D006239 1.2e-169 600.1 400 75.0
Rhsim07G0104300 Rhododendron simsii HOM05D005270 ORTHO05D006239 1.6e-169 599.7 399 75.2
Peaxi162Scf00002g00815 Petunia axillaris HOM05D005270 ORTHO05D006239 4.6e-169 598.2 400 75.0
PGSC0003DMG400004791 Solanum tuberosum HOM05D005270 ORTHO05D006239 1.3e-168 596.7 400 74.8
arahy.Tifrunner.gnm1.ann1.VW53Z5 Arachis hypogaea HOM05D005270 ORTHO05D006239 1.8e-168 596.3 405 76.8
Lalb_Chr05g0225581 Lupinus albus HOM05D005270 ORTHO05D006239 3.9e-168 595.1 404 77.2
MSTRG.25537 Avicennia marina HOM05D005270 ORTHO05D006239 5.1e-168 594.7 399 73.9
Cc08_g12920 Coffea canephora HOM05D005270 ORTHO05D006239 2.5e-167 592.4 390 75.1
Sc01g0009340 Simmondsia chinensis HOM05D005270 ORTHO05D006239 2.5e-167 592.4 399 74.4
Carub.0001s1190 Capsella rubella HOM05D005270 ORTHO05D006239 1.3e-166 590.1 406 74.1
THA.LOC104809459 Tarenaya hassleriana HOM05D005270 ORTHO05D006239 2.2e-166 589.3 407 75.4
Aa31LG1G2400 Aethionema arabicum HOM05D005270 ORTHO05D006239 3.7e-166 588.6 405 73.6
Lj4g0020394 Lotus japonicus HOM05D005270 ORTHO05D006239 4.8e-166 588.2 399 76.7
AL1G23510 Arabidopsis lyrata HOM05D005270 ORTHO05D006239 8.2e-166 587.4 406 73.4
TAR629G2769 Trochodendron aralioides HOM05D005270 ORTHO05D006239 1.4e-165 586.6 340 85.3
CARHR012530 Cardamine hirsuta HOM05D005270 ORTHO05D006239 4.1e-165 585.1 406 73.9
Glyma.17G138600 Glycine max HOM05D005270 ORTHO05D006239 6.9e-165 584.3 401 75.8
vmacro14106 Vaccinium macrocarpon HOM05D005270 ORTHO05D006239 6.9e-165 584.3 421 72.2
Ca_25339_v3 Cicer arietinum L. HOM05D005270 ORTHO05D006239 9.0e-165 583.9 400 75.8
Thhalv10007790m.g Eutrema salsugineum HOM05D005270 ORTHO05D006239 1.5e-164 583.2 407 72.7
Cpa.g.sc29.127 Carica papaya HOM05D005270 ORTHO05D006239 2.0e-164 582.8 511 63.8
C05p11010 Brassica napus HOM05D005270 ORTHO05D006239 4.5e-164 581.6 411 73.2
Oeu038010.1 Olea europaea HOM05D005270 ORTHO05D006239 4.5e-164 581.6 400 72.0
Psat4g070360 Pisum sativum HOM05D005270 ORTHO05D006239 4.5e-164 581.6 406 75.6
Sp1g10840 Schrenkiella parvula HOM05D005270 ORTHO05D006239 1.0e-163 580.5 406 73.2
BolC5t29844H Brassica oleracea HOM05D005270 ORTHO05D006239 1.3e-163 580.1 411 73.0
A06p09330 Brassica napus HOM05D005270 ORTHO05D006239 2.2e-163 579.3 408 73.5
PSO170G6680 Papaver somniferum HOM05D005270 ORTHO05D006239 2.2e-163 579.3 403 74.2
AT1G12230 Arabidopsis thaliana HOM05D005270 ORTHO05D006239 6.5e-163 577.8 428 70.1
MBI04_g37584_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 8.5e-163 577.4 393 75.3
SalBow1G0839 Salvia bowleyana HOM05D005270 ORTHO05D006239 1.4e-162 576.6 387 75.2
Migut.E01048 Erythranthe guttata HOM05D005270 ORTHO05D006239 2.5e-162 575.9 399 72.4
PSO017G6911 Papaver somniferum HOM05D005270 ORTHO05D006239 9.4e-162 573.9 400 73.5
BraA06t24120Z Brassica rapa HOM05D005270 ORTHO05D006239 2.1e-161 572.8 411 72.0
ATR1152G004 Amborella trichopoda HOM05D005270 ORTHO05D006239 2.3e-160 569.3 362 78.2
SGA_v2.0_scaffold144G35994 Striga asiatica HOM05D005270 ORTHO05D003965 3.0e-160 568.9 402 71.4
Medtr4g101620 Medicago truncatula HOM05D005270 ORTHO05D006239 8.8e-160 567.4 364 77.7
TPR.G37612 Trifolium pratense HOM05D005270 ORTHO05D006239 2.5e-159 565.8 356 80.1
Aqoxy7G00723 Aquilegia oxysepala HOM05D005270 ORTHO05D006239 4.8e-158 561.6 400 72.8
unitig_0.g1234 Utricularia gibba HOM05D005270 ORTHO05D006239 4.8e-158 561.6 399 70.9
HPP92_022434 Vanilla planifolia HOM05D005270 ORTHO05D006239 4.8e-158 561.6 400 70.0
HanXRQChr03g0087851 Helianthus annuus HOM05D005270 ORTHO05D006239 1.5e-156 556.6 393 72.0
Nitab4.5_0009175g0010 Nicotiana tabacum HOM05D005270 ORTHO05D006239 4.5e-156 555.1 410 70.7
Lsat_1_v5_gn_6_90321 Lactuca sativa HOM05D005270 ORTHO05D006239 2.2e-155 552.7 354 76.8
Duzib205G1833 Durio zibethinus HOM05D005270 ORTHO05D006239 3.8e-155 552.0 403 72.7
CDE12G0422 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 6.1e-153 544.7 399 70.4
Nitab4.5_0000993g0070 Nicotiana tabacum HOM05D005270 ORTHO05D006239 6.7e-152 541.2 400 69.5
ECA240G0014 Erigeron canadensis HOM05D000201 ORTHO05D006239 2.6e-151 539.3 393 70.0
AUR62007475 Chenopodium quinoa HOM05D005270 ORTHO05D006239 1.8e-149 533.1 391 71.1
DCAR_006814 Daucus carota HOM05D005270 ORTHO05D006239 6.5e-147 524.6 390 70.0
EL10Ac5g13010 Beta vulgaris HOM05D005270 ORTHO05D006239 9.4e-146 520.8 402 69.4
Phvul.003G218000 Phaseolus vulgaris HOM05D005270 ORTHO05D006239 2.3e-144 516.2 404 68.3
Zm00001eb172680 Zea mays HOM05D005270 ORTHO05D006239 3.9e-144 515.4 400 66.2
VMungo0251G3554 Vigna mungo HOM05D005270 ORTHO05D006239 5.2e-144 515.0 306 83.0
COL.COLO4_37215 Corchorus olitorius HOM05D005270 ORTHO05D006239 1.2e-140 503.8 284 86.6
AagrBONN_evm.TU.Sc2ySwM_369.586 Anthoceros agrestis HOM05D005270 ORTHO05D006239 3.8e-139 498.8 396 65.7
Pp3c15_6350 Physcomitrium patens HOM05D005270 ORTHO05D006239 2.0e-135 486.5 345 69.6
BcaC05g25195 Brassica carinata HOM05D005270 ORTHO05D006239 1.4e-133 480.3 383 66.1
SalBow1G5553 Salvia bowleyana HOM05D005270 ORTHO05D006239 7.7e-124 448.0 455 55.6
CBR_g37411 Chara braunii HOM05D005270 ORTHO05D006239 3.2e-109 399.4 337 58.8
Sed0011689 Sechium edule HOM05D005270 ORTHO05D006239 5.4e-85 318.9 248 71.0
Psat5g235160 Pisum sativum HOM05D005270 ORTHO05D006239 1.6e-81 307.4 267 62.9
Psat5g232960 Pisum sativum HOM05D005270 ORTHO05D006239 4.4e-79 299.3 267 61.0
Gorai.N027100 Gossypium raimondii HOM05D005270 ORTHO05D006239 5.6e-74 282.3 160 82.5
Mapoly0029s0033 Marchantia polymorpha HOM05D005270 ORTHO05D006239 3.1e-72 276.6 253 58.5
CDE04G1696 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 1.1e-69 268.1 178 74.7
Mapoly0029s0029 Marchantia polymorpha HOM05D005270 ORTHO05D006239 2.3e-67 260.4 203 63.1
Os08g0154300 Oryza sativa ssp. japonica HOM05D005270 ORTHO05D006239 2.1e-65 253.8 228 61.0
Haze_07851 Corylus avellana HOM05D005270 ORTHO05D006239 4.9e-62 242.7 260 54.6
Atru.chr9.1382 Acer truncatum HOM05D005270 ORTHO05D006239 2.5e-58 230.3 175 71.4
DCAR_004923 Daucus carota HOM05D005270 ORTHO05D006239 2.9e-54 216.9 308 44.5
CDE04G2727 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 7.4e-50 202.2 205 54.6
Atru.chr9.1383 Acer truncatum HOM05D005270 ORTHO05D006239 3.4e-47 193.4 110 85.5
AUR62039933 Chenopodium quinoa HOM05D005270 ORTHO05D006239 2.7e-44 183.7 110 80.9
Gorai.003G169200 Gossypium raimondii HOM05D005270 ORTHO05D006239 4.6e-44 183.0 146 68.5
Cre14.g630847 Chlamydomonas reinhardtii HOM05D005270 ORTHO05D006239 1.4e-43 181.4 364 37.9
SEGI_36758 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 9.7e-42 175.3 142 66.9
Cre01.g032650 Chlamydomonas reinhardtii HOM05D005270 ORTHO05D006239 1.3e-41 174.9 413 32.7
SEGI_05849 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 1.4e-40 171.4 100 81.0
SEGI_03700 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 9.1e-40 168.7 110 71.8
PRCOL_00004111 Prasinoderma coloniale HOM05D005270 ORTHO05D006239 2.3e-35 154.1 326 30.4
FAN11G3467 Fragaria x ananassa HOM05D005270 ORTHO05D006239 5.1e-35 152.9 166 53.6
FAN28G1011 Fragaria x ananassa HOM05D005270 ORTHO05D006239 6.7e-35 152.5 166 53.6
MCO13G140 Micromonas commoda HOM05D005270 ORTHO05D006239 3.3e-34 150.2 285 34.4
RcHm_v2.0_Chr6g0270571 Rosa chinensis HOM05D005270 ORTHO05D006239 9.7e-26 122.1 78 80.8
PRCOL_00004269 Prasinoderma coloniale HOM05D005270 ORTHO05D006239 2.8e-25 120.6 261 31.8
RcHm_v2.0_Chr6g0254981 Rosa chinensis HOM05D005270 ORTHO05D006239 3.8e-22 110.2 66 86.4
FAN04G2435 Fragaria x ananassa HOM05D005270 ORTHO05D006239 1.9e-21 107.8 60 90.0
Ca_29061_v3 Cicer arietinum L. HOM05D001546 ORTHO05D002908 3.2e-21 107.1 211 31.8
BcaC07g38600 Brassica carinata HOM05D000238 ORTHO05D037998 3.6e-20 103.6 105 56.2
FAN26G1714 Fragaria x ananassa HOM05D004635 ORTHO05D005899 5.7e-18 96.3 53 90.6
FAN14G3934 Fragaria x ananassa HOM05D000617 ORTHO05D000478 7.5e-18 95.9 55 87.3
FAN23G0587 Fragaria x ananassa HOM05D016072 ORTHO05D006239 1.7e-17 94.7 52 90.4
CAN.G1488.1 Capsicum annuum HOM05D005270 ORTHO05D006239 2.8e-17 94.0 130 42.3
GSVIVG01028518001 Vitis vinifera HOM05D005270 ORTHO05D006239 3.7e-17 93.6 49 87.8
MBI14_g06401_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 4.8e-17 93.2 53 84.9
BcaC07g41719 Brassica carinata HOM05D005270 ORTHO05D039702 1.8e-16 91.3 80 62.5
BolC8t52299H Brassica oleracea HOM05D005270 ORTHO05D039702 1.8e-16 91.3 80 62.5
FAN26G2512 Fragaria x ananassa HOM05D005270 ORTHO05D006239 2.4e-16 90.9 52 88.5
MBI03_g13472_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 2.4e-16 90.9 113 46.0
MBI15_g47610_MAGBIO Magnolia biondii HOM05D001260 ORTHO05D004134 3.1e-16 90.5 50 88.0
CSS0018551 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 5.4e-16 89.7 62 69.4
CAN.G605.8 Capsicum annuum HOM05D005270 ORTHO05D006239 7.0e-16 89.4 51 78.4
FAN10G1808 Fragaria x ananassa HOM05D016072 ORTHO05D006239 9.1e-16 89.0 48 91.7
FAN23G1777 Fragaria x ananassa HOM05D016072 ORTHO05D006239 9.1e-16 89.0 48 91.7
PRCOL_00005862 Prasinoderma coloniale HOM05D005270 ORTHO05D333221 9.1e-16 89.0 194 30.9
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 4.2e-13 80.1 85 51.8
SalBow1G3426 Salvia bowleyana HOM05D005270 ORTHO05D006239 4.7e-12 76.6 51 62.7
MBI18_g46779_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D004199 8.8e-11 72.4 43 81.4
MBI16_g06311_MAGBIO Magnolia biondii HOM05D001260 ORTHO05D004134 2.0e-10 71.2 40 87.5
C08p47590 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-07 61.6 75 48.0


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