Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 5.2e-190 667.5 333 100.0
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 4.1e-187 657.9 333 98.5
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.2e-159 566.6 321 86.6
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.6e-159 566.2 321 86.3
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.8e-159 565.5 321 84.7
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 6.2e-159 564.3 321 85.7
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.4e-158 563.1 324 83.3
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.8e-158 562.8 321 85.7
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.0e-157 559.3 324 83.3
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 5.8e-157 557.8 322 84.8
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 5.8e-157 557.8 321 85.4
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 9.9e-157 557.0 320 85.0
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-156 556.6 323 84.2
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.7e-156 556.2 324 84.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.7e-156 556.2 322 83.9
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 4.9e-156 554.7 321 83.8
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 6.4e-156 554.3 325 83.4
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 8.4e-156 553.9 322 83.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.1e-155 553.5 322 83.5
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.9e-155 552.7 322 83.9
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 4.2e-155 551.6 318 83.6
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.6e-154 549.7 325 83.1
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.6e-154 549.7 317 84.2
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 2.1e-154 549.3 324 83.6
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.3e-153 546.6 322 83.2
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.3e-153 546.6 325 83.1
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 3.0e-153 545.4 322 83.5
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.1e-152 543.5 328 80.2
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.5e-152 543.1 324 81.5
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.5e-152 543.1 328 80.2
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.5e-152 542.3 332 80.4
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 2.5e-152 542.3 324 82.1
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 4.3e-152 541.6 325 81.2
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 7.3e-152 540.8 322 82.9
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 7.3e-152 540.8 320 82.5
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 1.6e-151 539.7 326 81.9
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.6e-151 539.7 365 74.8
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.6e-151 539.7 325 81.8
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.1e-151 539.3 322 81.7
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.1e-151 539.3 324 80.9
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-150 537.0 332 79.8
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.1e-150 537.0 322 81.4
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.4e-150 536.6 364 74.7
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.0e-150 535.0 326 81.9
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 5.3e-150 534.6 316 82.6
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-149 533.1 332 78.9
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 9.9e-149 530.4 324 79.3
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 2.2e-148 529.3 324 81.5
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.9e-148 528.9 323 78.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 3.8e-148 528.5 321 81.0
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.9e-148 528.1 334 78.7
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 4.9e-148 528.1 322 80.1
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 6.4e-148 527.7 323 78.9
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 6.4e-148 527.7 301 85.7
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 6.4e-148 527.7 323 78.9
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 6.4e-148 527.7 324 80.9
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 8.4e-148 527.3 324 78.7
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.4e-147 526.6 321 81.3
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.9e-147 526.2 334 78.4
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 3.2e-147 525.4 325 79.4
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.2e-146 523.5 322 79.5
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.6e-146 523.1 309 83.5
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 7.8e-146 520.8 325 78.5
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 7.8e-146 520.8 322 79.2
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 1.0e-145 520.4 324 78.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-145 520.4 355 73.8
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.0e-145 520.4 323 78.0
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 8.7e-145 517.3 323 78.9
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.5e-144 515.8 324 77.5
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.3e-143 513.5 322 78.6
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.3e-143 513.5 332 78.0
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 3.1e-142 508.8 300 83.7
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.4e-139 500.0 320 77.5
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.9e-139 499.6 299 82.3
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.9e-137 491.9 327 74.6
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 5.1e-137 491.5 357 71.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 8.7e-137 490.7 322 76.4
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.1e-135 486.1 346 71.4
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.1e-135 486.1 346 71.4
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.8e-135 485.7 358 69.3
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.4e-134 483.4 300 81.7
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.8e-134 483.0 347 71.8
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.8e-134 483.0 285 82.8
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.0e-133 479.6 315 74.3
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.6e-133 479.2 296 79.1
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.6e-130 468.4 373 66.8
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.8e-129 466.5 322 71.4
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.8e-129 466.5 284 81.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 2.3e-129 466.1 329 72.3
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 7.4e-128 461.1 320 71.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.1e-127 459.5 267 82.0
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.5e-125 453.4 323 73.4
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 5.8e-125 451.4 283 78.1
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.8e-124 448.7 285 77.5
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 6.5e-124 448.0 375 65.1
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 3.0e-121 439.1 283 77.7
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 5.7e-120 434.9 300 72.0
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.5e-117 426.8 263 79.5
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.6e-117 426.0 321 67.6
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 3.4e-117 425.6 299 70.2
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 6.7e-113 411.4 317 63.4
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 9.7e-112 407.5 283 71.4
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 5.9e-109 398.3 320 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.0e-108 397.5 322 60.9
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.3e-108 397.1 233 83.7
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.2e-108 396.4 292 67.1
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.9e-107 393.3 330 59.7
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 8.8e-105 384.4 322 59.3
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 5.7e-104 381.7 284 69.0
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 4.5e-101 372.1 282 70.2
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.6e-98 363.6 222 78.4
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 2.4e-94 349.7 316 53.8
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.7e-92 343.6 246 69.9
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.4e-88 329.3 234 69.7
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 9.1e-86 321.2 220 72.3
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.7e-77 291.6 225 67.6
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.5e-75 287.3 364 45.1
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 1.1e-57 228.0 150 78.7
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.1e-54 218.0 177 65.0
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.5e-51 206.8 328 39.0
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.1e-50 201.8 143 71.3
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 4.3e-43 179.5 129 67.4
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.2e-42 177.9 116 70.7
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.6e-37 161.0 283 37.5
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.1e-34 148.7 94 77.7
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.6e-18 97.8 97 51.5
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 5.8e-16 89.4 65 64.6
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 3.8e-15 86.7 39 97.4
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 7.1e-14 82.4 77 62.3


User provided reference genes

Program Settings