Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-130 468.4 214 100.0
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-124 449.1 210 97.1
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 5.3e-119 431.0 209 94.7
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-118 429.9 210 94.8
CANSAT25G1105 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-90 335.9 154 98.1
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 7.9e-83 310.8 147 98.0
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-71 273.9 143 92.3
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-66 256.5 214 54.2
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-43 179.1 167 48.5
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 6.4e-40 168.3 142 54.9
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 8.3e-40 167.9 212 35.4
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 4.1e-39 165.6 212 36.3
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 7.0e-39 164.9 212 36.3
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-36 157.5 212 34.0
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 9.5e-36 154.5 173 39.9
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-35 153.7 212 34.0
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 4.7e-35 152.1 173 39.3
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-34 149.8 212 33.0
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 8.9e-34 147.9 129 48.8
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-32 142.5 173 39.3
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 2.0e-30 136.7 112 53.6
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 1.0e-29 134.4 224 31.2
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 8.9e-26 121.3 185 30.3
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 4.4e-25 119.0 187 34.2
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 7.5e-25 118.2 192 32.8
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-21 106.7 213 28.6
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 3.9e-21 105.9 210 27.1
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-19 100.5 138 30.4
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-18 97.4 121 37.2
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 9.9e-17 91.3 120 30.0
CANSAT56G0636 Cannabis sativa HOM05D002438 ORTHO05D002617 2.9e-16 89.7 52 80.8
CANSAT25G3676 Cannabis sativa HOM05D008058 ORTHO05D010564 9.2e-15 84.7 126 31.7
CANSAT80G0885 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-14 83.6 126 31.0
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-14 83.2 96 40.6
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 1.0e-13 81.3 208 23.6
CANSAT25G0360 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-13 79.7 126 29.4
CANSAT54G1975 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-13 79.7 34 100.0
CANSAT21G2068 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-12 77.4 34 97.1
CANSAT11G0773 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-12 76.3 118 30.5
CANSAT21G1982 Cannabis sativa HOM05D008058 ORTHO05D010564 5.6e-12 75.5 104 34.6
CANSAT56G0610 Cannabis sativa HOM05D008058 ORTHO05D010564 7.3e-12 75.1 104 32.7
CANSAT56G2831 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-11 73.6 100 33.0
Oeu026953.1 Olea europaea HOM05D008641 ORTHO05D000397 6.2e-11 72.0 209 21.5
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 1.1e-10 71.2 217 26.7
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 1.8e-10 70.5 221 24.4
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 1.8e-10 70.5 187 23.5
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 2.4e-10 70.1 114 32.5
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 3.1e-10 69.7 114 32.5
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 5.2e-10 68.9 212 21.2
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 6.9e-10 68.6 114 31.6
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 8.9e-10 68.2 218 23.4
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 8.9e-10 68.2 216 23.1
AL3G21260 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.0e-09 67.0 203 23.6
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-09 67.0 216 23.1
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-09 67.0 190 23.2
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.0e-09 67.0 214 22.9
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.0e-09 67.0 214 22.9
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 2.6e-09 66.6 216 23.1
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 3.4e-09 66.2 216 23.6
Oeu046709.1 Olea europaea HOM05D008641 ORTHO05D000397 3.4e-09 66.2 178 21.9
Aa31LG11G7310 Aethionema arabicum HOM05D000471 ORTHO05D000199 5.8e-09 65.5 216 23.6
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 5.8e-09 65.5 212 22.2
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 5.8e-09 65.5 215 22.3
TWI38G1152 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.8e-09 65.5 214 22.4
Thhalv10000500m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.9e-09 64.7 190 22.1
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.9e-09 64.7 209 23.9
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-08 64.3 216 22.7
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 1.3e-08 64.3 138 26.8
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.3e-08 64.3 144 29.2
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 1.7e-08 63.9 142 28.9
TWI77G0217 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-08 63.9 206 22.8
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-08 63.9 207 21.7
CANSAT01G2382 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-08 63.5 56 46.4
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 2.2e-08 63.5 217 26.7
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-08 63.5 169 24.9
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-08 63.2 171 24.0
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 2.9e-08 63.2 143 26.6
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.9e-08 63.2 127 29.1
TWI32G1169 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.9e-08 63.2 209 23.4
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.9e-08 63.2 207 21.7
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.9e-08 63.2 207 21.7
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 4.9e-08 62.4 138 26.8
Aa31sc1276G30 Aethionema arabicum HOM05D000471 ORTHO05D000199 6.4e-08 62.0 216 23.1
BcaB06g26519 Brassica carinata HOM05D000471 ORTHO05D000199 6.4e-08 62.0 129 27.1
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 6.4e-08 62.0 199 21.1
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 8.4e-08 61.6 213 22.1
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-07 61.2 218 25.7
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-07 61.2 147 25.9
SGA_v2.0_scaffold61G21229 Striga asiatica HOM05D008585 ORTHO05D000397 1.1e-07 61.2 200 22.0
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-07 60.8 138 26.1
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-07 60.8 138 28.3
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-07 60.8 138 26.1
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-07 60.8 208 21.2
Oeu026241.1 Olea europaea HOM05D008641 ORTHO05D000397 1.9e-07 60.5 178 19.7
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.9e-07 60.5 209 23.9
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 2.4e-07 60.1 216 22.7
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-07 59.7 224 24.6
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 5.4e-07 58.9 144 23.6
SGA_v2.0_scaffold9G04780 Striga asiatica HOM05D008585 ORTHO05D000397 5.4e-07 58.9 211 22.3
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 7.1e-07 58.5 215 23.3
BolC3t17389H Brassica oleracea HOM05D000471 ORTHO05D000199 9.3e-07 58.2 132 28.8
C05p25640 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-06 57.8 129 27.1
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 1.2e-06 57.8 127 26.0
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 1.2e-06 57.8 210 23.8
C09p52060 Brassica napus HOM05D000471 ORTHO05D000199 1.6e-06 57.4 131 26.7
BolC1t02789H Brassica oleracea HOM05D000471 ORTHO05D000199 1.6e-06 57.4 132 28.0
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 1.6e-06 57.4 212 23.6
BolC3t15887H Brassica oleracea HOM05D000471 ORTHO05D000199 2.1e-06 57.0 132 28.0
BolC9t55149H Brassica oleracea HOM05D000471 ORTHO05D000199 2.1e-06 57.0 132 28.8
Oeu043713.1 Olea europaea HOM05D000700 ORTHO05D000397 2.1e-06 57.0 169 21.9
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.7e-06 56.6 143 22.4
BcaB04g16995 Brassica carinata HOM05D000675 ORTHO05D003044 2.7e-06 56.6 181 23.2
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 2.7e-06 56.6 132 31.8
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 2.7e-06 56.6 144 22.9
C01p33600 Brassica napus HOM05D000471 ORTHO05D000199 2.7e-06 56.6 131 26.7
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 2.7e-06 56.6 154 23.4
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 2.7e-06 56.6 219 23.7
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 2.7e-06 56.6 219 23.7
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.7e-06 56.6 169 22.5
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-06 56.2 132 31.8
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-06 56.2 213 21.6
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-06 56.2 143 26.6
BolC2t10933H Brassica oleracea HOM05D000471 ORTHO05D000199 3.5e-06 56.2 131 26.0
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 3.5e-06 56.2 178 24.2
BolC9t56784H Brassica oleracea HOM05D000471 ORTHO05D000199 3.5e-06 56.2 130 28.5
BolC9t58070H Brassica oleracea HOM05D000471 ORTHO05D000199 3.5e-06 56.2 131 26.0
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 3.5e-06 56.2 144 23.6
CANSAT56G3292 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-06 56.2 78 29.5
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.5e-06 56.2 130 25.4
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.5e-06 56.2 137 25.5
Oeu057735.1 Olea europaea HOM05D000700 ORTHO05D000397 3.5e-06 56.2 165 23.0
A05p23450 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.0
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-06 55.8 178 24.2
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-06 55.8 178 24.2
C01p28620 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-06 55.8 130 27.7
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-06 55.8 178 24.2
C07p13290 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.7
BolC2t09815H Brassica oleracea HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.0
BolC3t16855H Brassica oleracea HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.0
BolC4t24633H Brassica oleracea HOM05D000471 ORTHO05D000199 4.6e-06 55.8 128 26.6
BolC5t30926H Brassica oleracea HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.0
BolC7t41823H Brassica oleracea HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.7
BraA05t21209Z Brassica rapa HOM05D000471 ORTHO05D000199 4.6e-06 55.8 131 26.0
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 4.6e-06 55.8 178 24.2
Oeu000458.1 Olea europaea HOM05D000700 ORTHO05D000397 4.6e-06 55.8 169 24.9
Oeu055861.1 Olea europaea HOM05D000700 ORTHO05D000397 4.6e-06 55.8 128 24.2
Oeu037297.1 Olea europaea HOM05D000700 ORTHO05D000397 6.0e-06 55.5 169 21.9
C05p23290 Brassica napus HOM05D000471 ORTHO05D000199 7.8e-06 55.1 130 27.7
BolC1t01994H Brassica oleracea HOM05D000471 ORTHO05D000199 7.8e-06 55.1 107 28.0
BolC1t04358H Brassica oleracea HOM05D000471 ORTHO05D000199 7.8e-06 55.1 131 26.0
BolC2t10178H Brassica oleracea HOM05D000471 ORTHO05D000199 7.8e-06 55.1 131 26.0
TWI18G1213 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.8e-06 55.1 145 24.8


User provided reference genes

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