Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 2.9e-84 315.1 147 100.0
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 9.3e-83 310.1 147 98.0
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 4.5e-77 291.2 143 93.7
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-72 275.8 142 91.5
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-71 273.1 143 93.0
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 2.8e-71 271.9 143 90.2
CANSAT25G1105 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-57 226.1 106 99.1
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-42 175.6 146 56.2
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 5.7e-40 167.9 142 54.9
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-30 136.3 112 53.6
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-27 126.7 144 41.7
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-26 122.9 144 40.3
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-26 122.9 144 40.3
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-26 122.5 142 38.7
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 8.0e-26 120.9 142 40.8
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-24 117.1 142 37.3
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 3.4e-24 115.5 142 36.6
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 2.8e-23 112.5 141 39.7
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 8.3e-23 110.9 142 37.3
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 2.9e-20 102.4 99 49.5
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-19 99.0 155 32.9
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 4.2e-19 98.6 155 32.9
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-18 96.3 121 37.2
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-18 95.5 147 33.3
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-15 86.7 115 33.9
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 4.1e-14 82.0 96 40.6
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 5.4e-14 81.6 115 33.0
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-11 73.9 141 28.4
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-11 72.4 144 29.9
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-10 70.5 114 32.5
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-10 70.1 114 32.5
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-10 68.9 114 31.6
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 4.7e-10 68.6 61 47.5
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-08 63.9 142 28.9
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 1.5e-08 63.5 138 26.8
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.5e-08 63.5 127 29.1
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.6e-08 62.8 146 29.5
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 4.4e-08 62.0 138 26.8
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 5.8e-08 61.6 138 26.8
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 7.5e-08 61.2 142 27.5
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 9.8e-08 60.8 138 28.3
BcaB06g26519 Brassica carinata HOM05D000471 ORTHO05D000199 1.7e-07 60.1 129 26.4
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.7e-07 60.1 138 26.1
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 1.7e-07 60.1 138 23.9
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 1.7e-07 60.1 138 26.1
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-07 59.7 142 26.8
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-07 59.3 142 26.8
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 2.9e-07 59.3 138 26.8
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 2.9e-07 59.3 138 29.0
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 3.7e-07 58.9 138 24.6
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 3.7e-07 58.9 142 26.8
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 4.9e-07 58.5 141 27.0
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 8.3e-07 57.8 130 23.8
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 8.3e-07 57.8 130 23.8
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 8.3e-07 57.8 138 24.6
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 8.3e-07 57.8 129 24.8
Thhalv10000500m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.3e-07 57.8 129 24.0
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-06 57.4 130 25.4
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-06 57.4 143 30.1
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 1.1e-06 57.4 127 26.0
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-06 57.0 138 24.6
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 1.4e-06 57.0 142 23.2
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 1.9e-06 56.6 142 26.1
C01p28620 Brassica napus HOM05D000471 ORTHO05D000199 1.9e-06 56.6 130 28.5
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 1.9e-06 56.6 143 29.4
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 1.9e-06 56.6 138 23.9
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.4e-06 56.2 146 27.4
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 2.4e-06 56.2 132 31.8
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.4e-06 56.2 132 25.0
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.4e-06 56.2 137 25.5
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.2e-06 55.8 130 24.6
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 3.2e-06 55.8 132 31.8
Oeu055861.1 Olea europaea HOM05D000700 ORTHO05D000397 3.2e-06 55.8 128 24.2
C09p52060 Brassica napus HOM05D000471 ORTHO05D000199 4.1e-06 55.5 131 26.0
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 7.0e-06 54.7 142 22.5
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 7.0e-06 54.7 138 27.5
C01p33600 Brassica napus HOM05D000471 ORTHO05D000199 7.0e-06 54.7 131 26.0
Aa31sc230G20 Aethionema arabicum HOM05D000471 ORTHO05D000199 9.2e-06 54.3 144 27.1
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 9.2e-06 54.3 140 26.4
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 9.2e-06 54.3 140 25.7
BolC9t58070H Brassica oleracea HOM05D000471 ORTHO05D000199 9.2e-06 54.3 131 25.2
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 9.2e-06 54.3 142 23.2


User provided reference genes

Program Settings