Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.6e-54 215.7 101 100.0
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 2.9e-43 178.3 104 82.7
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.9e-43 178.3 104 80.8
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 3.8e-43 177.9 103 80.6
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 6.5e-43 177.2 104 80.8
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 6.5e-43 177.2 103 81.6
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 1.1e-42 176.4 104 80.8
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.1e-42 176.4 104 80.8
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.4e-42 176.0 101 81.2
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.9e-42 175.6 103 80.6
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.2e-42 174.9 101 81.2
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.2e-42 174.9 101 81.2
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 3.2e-42 174.9 101 81.2
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 4.2e-42 174.5 106 77.4
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 4.2e-42 174.5 103 81.6
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 4.2e-42 174.5 104 78.8
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 4.2e-42 174.5 105 77.1
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 5.5e-42 174.1 101 80.2
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 7.1e-42 173.7 104 77.9
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 9.3e-42 173.3 104 78.8
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.2e-41 172.9 104 78.8
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 2.7e-41 171.8 104 78.8
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.7e-41 171.8 101 79.2
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 3.5e-41 171.4 101 79.2
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 4.6e-41 171.0 104 77.9
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 1.3e-40 169.5 110 72.7
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.3e-40 169.5 103 78.6
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 2.3e-40 168.7 105 77.1
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 3.9e-40 167.9 106 76.4
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 3.9e-40 167.9 104 76.0
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 5.1e-40 167.5 112 73.2
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 5.1e-40 167.5 103 80.6
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 8.7e-40 166.8 105 76.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 8.7e-40 166.8 102 76.5
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.1e-39 166.4 104 74.0
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.1e-39 166.4 103 77.7
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.1e-39 166.4 104 75.0
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.9e-39 165.6 104 75.0
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 1.9e-39 165.6 106 73.6
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 7.4e-39 163.7 106 73.6
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 9.6e-39 163.3 113 69.9
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 9.6e-39 163.3 106 72.6
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 3.7e-38 161.4 77 90.9
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 6.3e-38 160.6 94 78.7
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 6.3e-38 160.6 107 72.9
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 8.2e-38 160.2 105 71.4
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.1e-37 159.8 106 71.7
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 1.8e-37 159.1 105 70.5
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.8e-37 159.1 112 70.5
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.4e-37 158.7 104 72.1
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 6.9e-37 157.1 107 71.0
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.0e-36 155.6 111 68.5
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 4.5e-36 154.5 111 68.5
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 5.9e-36 154.1 111 68.5
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 5.9e-36 154.1 111 68.5
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 5.9e-36 154.1 111 68.5
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 5.9e-36 154.1 107 72.0
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 7.6e-36 153.7 101 71.3
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 7.6e-36 153.7 101 74.3
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 7.6e-36 153.7 106 69.8
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.0e-35 153.3 103 72.8
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 1.3e-35 152.9 104 71.2
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 2.2e-35 152.1 111 67.6
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.2e-35 152.1 101 69.3
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 2.2e-35 152.1 104 69.2
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.9e-35 151.8 74 90.5
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.9e-35 151.8 112 67.9
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 2.9e-35 151.8 101 68.3
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.0e-35 151.0 106 69.8
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 5.0e-35 151.0 106 71.7
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 6.5e-35 150.6 90 77.8
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 6.5e-35 150.6 113 66.4
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 8.4e-35 150.2 75 89.3
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.1e-34 149.8 112 67.0
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.9e-34 149.1 106 67.9
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 3.2e-34 148.3 113 67.3
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 3.2e-34 148.3 103 68.9
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 4.2e-34 147.9 113 67.3
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 9.3e-34 146.7 74 83.8
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 9.3e-34 146.7 115 61.7
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 9.3e-34 146.7 106 67.9
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 9.3e-34 146.7 106 68.9
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 9.3e-34 146.7 107 69.2
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.2e-33 146.4 113 66.4
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.2e-33 146.4 112 66.1
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.2e-33 146.4 113 66.4
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.6e-33 146.0 112 66.1
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.6e-33 146.0 112 66.1
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 3.5e-33 144.8 106 67.0
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 3.5e-33 144.8 106 67.0
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.0e-32 143.3 103 68.0
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.0e-32 143.3 105 66.7
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.3e-32 142.9 114 64.9
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 1.8e-32 142.5 114 62.3
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 4.3e-31 137.9 103 65.0
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.6e-30 136.0 103 65.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 2.2e-30 135.6 66 89.4
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 3.1e-29 131.7 66 86.4
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 5.3e-29 131.0 80 75.0
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 5.9e-28 127.5 76 76.3
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 7.7e-28 127.1 62 88.7
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.0e-27 126.7 64 85.9
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 3.8e-27 124.8 77 74.0
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 6.5e-27 124.0 73 75.3
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.1e-26 123.2 65 86.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 2.5e-26 122.1 74 70.3
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 7.2e-26 120.6 93 61.3
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.1e-25 119.0 72 69.4
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.0e-24 116.7 73 67.1
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.4e-24 116.3 62 83.9
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.3e-22 109.8 73 69.9
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 2.2e-22 109.0 65 78.5
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.2e-19 99.0 64 76.6
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.1e-18 96.7 69 72.5
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.1e-17 92.4 77 55.8
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.1e-15 86.7 74 56.8
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 2.2e-14 82.4 68 63.2
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.0e-11 73.6 38 84.2
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 4.7e-09 64.7 35 77.1


User provided reference genes

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